Sequence of DPV Infectious pancreatic necrosis virus
Infectious pancreatic necrosis virus (Jasper serotype) VP1 gene, complete cds.
ACC No: M58756
Dated: 2000-03-04 | Length: 2784 | CRC: -921984851
!!NA_SEQUENCE 1.0
ID IPNVP1JA standard; RNA; VRL; 2784 BP.
XX
AC M58756;
XX
SV M58756.1
XX
DT 12-MAR-1991 (Rel. 27, Created)
DT 04-MAR-2000 (Rel. 63, Last updated, Version 5)
XX
DE Infectious pancreatic necrosis virus (Jasper serotype) VP1 gene, complete
DE cds.
XX
KW GTP-binding protein; RNA-dependent RNA polymerase; viral protein 1; VP1.
XX
OS Infectious pancreatic necrosis virus
OC Viruses; dsRNA viruses; Birnaviridae; Aquabirnavirus.
XX
RN [1]
RP 1-2784
RX MEDLINE; 91196245.
RA Duncan R., Mason C.L., Nagy E., Leong J.-A., Dobos P.;
RT "Sequence analysis of infectious pancreatic necrosis virus genome segment B
RT and its encoded VP1 protein: A putative RNA-dependent RNA polymerase
RT lacking the Gly-Asp-Asp motif";
RL Virology 181:541-552(1991).
XX
DR SWISS-PROT; P22173; RRPO_IPNVJ.
XX
FH Key Location/Qualifiers
FH
FT source 1. .2784
FT /db_xref="taxon:11002"
FT /organism="Infectious pancreatic necrosis virus"
FT /strain="Jasper serotype"
FT CDS 101. .2638
FT /codon_start=1
FT /db_xref="SWISS-PROT:P22173"
FT /note="putative RNA-dependent RNA polymerase; putative"
FT /standard_name="VP1"
FT /product="viral protein 1"
FT /protein_id="AAA46243.1"
FT /translation="MSDIFNSPQNKASILTALMKSTTGDVEDVLIPKRFRPAKDPLDSP
FT QAAAQFLKDNKYRILRPRAIPTMVELETDAALPRLRQMVEDGKLKDTVSVPEGTTAFYP
FT KYYPFHKPDHDEVGTFGAPDITLLKQLTFFLLENDFPTGPETLRQVREAIATLQYGSGS
FT YSGQLNRLLAMKGVATGRNPNKTPKTVGYTNEQLAKLLEQTLPINTPKHEDPDLRWAPS
FT WLINYTGDLSTDKSYLPHVTIKSSAGLPYIGKTKGDTTAEALVLADSFIRDLGRAATSA
FT DPEAGVKKTITDFWYLSCGLLFPKGERYTQVDWDKKTRNIWSAPYPTHLLLSMVSTPVM
FT NESKLNITNTQTPSLYGFSPFHGGMDRIMTIIRDSLDNDEDLVMIYADNIYILQDNTWY
FT SIDLEKGEANCTPQHMQAMMYYLLTRGWTNEDGSPRYNPTWATFAMNVAPSMVVDSSCL
FT LMNLQLKTYGQGSGNAFTFLNNHLMSTIVVAEWVKAGKPNPMTKEFMDLEEKTGINFKI
FT ERELKNLRETIVEAVETAPQDGYLADGSDLPPIRPGKAVELDLLGWSAIYSRQMEMFVP
FT VLENERLIASAAYPKGLENKALARKPGAEIAYQIVRYEAIRLVGGWNNPLLETAAKHMS
FT LDKRKRLEVKGIDVTGFLDDWNNMSEFGGDLEGITLSEPLTNQTLVDINTPLDSFDPKA
FT RPQTPRSPKKTLDEVTTAITSGTYKDPKSAVWRLLDQRTKLRVSTLRDQALALKPASSS
FT VDNWAEATEELAQQQQLLMKANNLLKSSLTETREALETIQSDKIIAGKSNPEKNPGTAA
FT NPVVGYGEFSEKIPLTPTQKKNAKRREKQRRNQ"
XX
SQ Sequence 2784 BP; 860 A; 813 C; 688 G; 423 T; 0 other;
M58756 Length: 2784 September 18, 2002 10:51 Type: N Check: 7168 ..
1 ggaaacagtg ggtcaacgtt ggtggcaccc gacataccac gactgtttac
51 gtatgcacgc aagtgccctt taacaaaacc ctatacacac aactcatgat
101 atgtcggaca tcttcaactc accacaaaac aaggcatcca tcttgactgc
151 tctgatgaag agcacaacag gagacgtaga ggacgtgctg ataccaaaac
201 gcttcaggcc agccaaggac cccctcgaca gcccgcaagc agcagcacag
251 ttcctgaagg acaacaagta ccggatactt aggccgcgag ccatcccgac
301 catggtcgaa ctagagacag atgccgctct gcctcgactg cgacaaatgg
351 tggaagacgg caagcttaag gacacggtaa gcgtcccaga aggaaccact
401 gcgttctacc caaagtacta cccattccac aagccagacc atgacgaagt
451 ggggacgttc ggggctccgg acatcacact tctgaagcaa ctcaccttct
501 tcctgttgga gaatgacttc ccaacaggac cggagacgct cagacaagtc
551 cgagaagcca tagccacact tcagtacggc tcaggcagct actcaggaca
601 gctgaacagg ctcctagcaa tgaagggcgt cgccactggc aggaatccaa
651 acaagactcc aaaaacagtg ggctacacga acgaacagct agcaaaactg
701 ctggagcaaa cactaccgat caacacacca aagcatgagg accccgacct
751 ccggtgggcc ccaagctggc tgatcaacta caccggagac ctgagcacag
801 acaagtcata tctgccacat gtgaccataa agtcctcagc cggcctacca
851 tacataggca aaaccaaagg agacacgacg gcagaagcgc tcgtactggc
901 tgactccttc atacgtgacc tcggaagagc cgccacatca gcagacccag
951 aagcaggtgt gaagaaaacc atcaccgact tctggtacct gagctgtggg
1001 ctgctcttcc caaagggcga aagatacaca caagtggact gggacaagaa
1051 gaccagaaac atttggagcg cgccctaccc aacacaccta ctactatcaa
1101 tggtgtcaac cccggtgatg aacgagtcca aactcaacat caccaacacc
1151 cagaccccgt ctctgtacgg gttctcacca ttccacggag gaatggacag
1201 aatcatgaca atcataagag acagcctgga caatgacgag gacctagtca
1251 tgatctatgc ggacaacatc tacatactgc aggacaacac atggtactca
1301 attgacctgg agaaaggcga ggccaactgc actccacagc acatgcaggc
1351 catgatgtac tacctcctga cgaggggatg gacgaacgag gacggctcac
1401 cgcgatacaa cccgacatgg gccacattcg caatgaacgt cgctccatcc
1451 atggtggtgg actcatcgtg tcttttgatg aaccttcaac tgaagaccta
1501 cggccagggc agtgggaatg cctttacatt cctgaacaac cacctcatgt
1551 ccacaatagt cgtggccgag tgggtaaaag cagggaaacc aaaccccatg
1601 accaaagagt tcatggacct cgaggagaaa acgggcatca acttcaagat
1651 agagcgcgag ctgaaaaacc ttagagagac catcgttgag gccgtcgaga
1701 cggcacccca ggatggatac ctcgccgatg ggtccgacct accccccatc
1751 agaccaggaa aagcagtaga gcttgacctg ctcgggtggt cggccatcta
1801 cagccgccaa atggagatgt tcgttccagt cctcgagaac gagagactaa
1851 ttgcctcagc agcctaccca aaggggctcg agaacaaagc cctggccaga
1901 aaacccggag ccgagattgc gtaccagata gtgcggtacg aggcaatcag
1951 gctggtaggc ggctggaaca atccgctact agagaccgcg gccaaacaca
2001 tgtccctcga caagaggaag agactggaag tgaaggggat agacgtcacc
2051 ggattcctcg atgactggaa caacatgtcc gaattcggag gagacctaga
2101 aggaataacg ctatcagaac ccctaacaaa ccaaacactt gttgacatca
2151 acacgccgct ggacagcttt gaccccaagg caagacccca aacacccagg
2201 tctccaaaga agactctaga cgaggtgact acggccatca cctcgggcac
2251 atacaaggac cccaaaagcg ctgtgtggcg actgctagac cagaggacca
2301 aactccgagt cagcacacta cgagatcaag cactagcgct aaaacccgcg
2351 tcgtcctcgg tggacaactg ggccgaagcc actgaggaac tggcacaaca
2401 gcaacagcta ctcatgaagg ccaacaatct gctgaagagc agcctgacgg
2451 agacaagaga agcactggag accatccagt cagacaaaat catcgcaggg
2501 aaatccaacc ccgagaagaa cccggggacc gcagccaacc cagtcgttgg
2551 ctacggggaa ttcagtgaga agattcctct gacccccacg cagaaaaaga
2601 atgccaagcg gagggaaaag cagagaagaa accagtaaga agacccaaac
2651 cgggaagaat ccgaaatgaa tcagctggac tcatatgaaa gctccgcgcc
2701 gcacggcaag ctggacaaaa gtagtgaccc gacaacgtgc caccaacatg
2751 acccctgaaa acatccggtt ccgccaggga cccc