Sequence of DPV Rotavirus C

Porcine rotavirus group C NS34 protein (gene 6) gene, complete cds.

ACC No: M69115

Dated: 2000-03-04 | Length: 1348 | CRC: 612316514

                !!NA_SEQUENCE 1.0
ID   PRVNS34    standard; RNA; VRL; 1348 BP.
XX
AC   M69115;
XX
SV   M69115.1
XX
DT   09-JUL-1991 (Rel. 28, Created)
DT   04-MAR-2000 (Rel. 63, Last updated, Version 3)
XX
DE   Porcine rotavirus group C NS34 protein (gene 6) gene, complete cds.
XX
KW   nonstructural protein; NS34 protein.
XX
OS   Porcine group C rotavirus
OC   Viruses; dsRNA viruses; Reoviridae; Rotavirus; Group C rotaviruses.
XX
RN   [1]
RP   1-1348
RX   MEDLINE; 91361567.
RA   Qian Y., Jiang B., Saif L.J., Kang S.Y., Ojeh C.K., Green K.Y.;
RT   "Molecular analysis of the gene 6 from a porcine group C rotavirus that
RT   encodes the NS34 equivalent of group a rotaviruses";
RL   Virology 184:752-757(1991).
XX
DR   SWISS-PROT; P27586; VN34_ROTPC.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1348
FT                   /db_xref="taxon:10968"
FT                   /organism="Porcine group C rotavirus"
FT                   /strain="Cowden"
FT                   /tissue_lib="Cowden GpC library"
FT   CDS             25. .1233
FT                   /codon_start=1
FT                   /db_xref="SWISS-PROT:P27586"
FT                   /note="gene segment 6"
FT                   /product="NS34 protein"
FT                   /gene="gene 6"
FT                   /protein_id="AAA47087.1"
FT                   /translation="MATQASVEWIFNIAGSAASASIAKAIKDAGGSEDFAKYVIARFYD
FT                   NYKDSVDDTGVYNACIGRARTVDKALDDSRKAERNEDWHTNLETISRLDLELAELKLIL
FT                   SNLGIKREDRVLNSMFSVVREEGKSSNTVMLKQNAVRMIEEGKLKIRVERNENYTASLK
FT                   NKIEELECMIDAFEKGKEIIISLDAMNGEVKRDGNSCSYNSTAAFVSTIVGNPIKMYDE
FT                   SGKPLFDVGDYLNPKHIIDKMIENEIPIFKSDYRNNESPDFDVWNERSNLKIVSINDCH
FT                   AICVFKFENAWWCFDDGVLNKYSGNGNPLIVANAKFQIDKILISGDVELNPGPDPLIRL
FT                   NDCKTKYGIDIICRFYIVLDNDGSIIHMCYMRTGSAEAVAKGRSKKEAKRIAAKDILDQ
FT                   IGL"
XX
SQ   Sequence 1348 BP; 481 A; 165 C; 296 G; 406 T; 0 other;

M69115  Length: 1348  December 21, 2001 15:56  Type: N  Check: 4930  ..

       1  ctcttttaaa agcacttgct ggaaatggcg actcaggctt ccgttgaatg
      51  gattttcaac attgccggat cagctgcttc ggcttcaatt gcaaaggcta
     101  tcaaggatgc tggaggaagt gaagattttg caaaatatgt tattgccagg
     151  ttttatgata actataaaga tagtgtagat gacactggtg tttataatgc
     201  atgtattgga agggctagaa ctgtggataa ggctttggat gactcaagga
     251  aagcagaaag aaatgaagat tggcatacta atctagaaac gataagcagg
     301  cttgatttgg aattggccga attaaaatta atattatcaa atttaggaat
     351  taagagagag gatagagtac taaattcaat gttttctgtg gttagagaag
     401  aaggtaaatc atcaaatact gtcatgttaa agcaaaatgc agtaagaatg
     451  attgaagaag gaaaattaaa aattagagtt gagagaaatg agaattatac
     501  tgcatcactt aaaaataaga tagaagaact agaatgtatg attgatgctt
     551  ttgaaaaagg gaaagagatc attattagtt tagatgctat gaatggtgag
     601  gtgaagagag atggcaactc atgttcatat aattcaactg ctgcatttgt
     651  ctctacaatc gtaggtaatc caattaaaat gtatgatgag tcaggcaaac
     701  cattgtttga tgtaggtgac tacttaaatc ctaaacatat cattgataaa
     751  atgatagaaa atgaaatacc aatctttaaa tcagattaca gaaataatga
     801  atcaccagat tttgatgtat ggaatgaaag gagtaatctt aagattgtta
     851  gtataaatga ctgtcatgca atttgtgtgt ttaaatttga gaatgcttgg
     901  tggtgctttg atgatggtgt gcttaataaa tacagtggta atggtaaccc
     951  attgattgtt gcaaatgcta aattccaaat tgacaaaatt ttaatttctg
    1001  gagatgttga attgaatcct ggacctgatc cacttatcag attgaatgat
    1051  tgcaagacta agtatggtat tgatattatc tgcagattct atattgtatt
    1101  agacaatgat ggttcaatca ttcatatgtg ttatatgaga actggatctg
    1151  cagaggcagt tgctaaagga aggtcaaaga aagaagcaaa gagaatagct
    1201  gcaaaagaca tccttgatca gattggatta taaactatgt tactattgaa
    1251  tgaccgctaa tagtccagaa tatgcggagc actgagttac cgacttaatt
    1301  gtctgacagc aagtaaaagg tcaatggcag actgcttaca atgtggct