Sequence of DPV Rotavirus B

Rotavirus group B major inner capsid protein mRNA, complete cds.

ACC No: M84456

Dated: 2000-03-04 | Length: 1271 | CRC: -138827203

                !!NA_SEQUENCE 1.0
ID   ROTBMICP   standard; RNA; VRL; 1271 BP.
XX
AC   M84456;
XX
SV   M84456.1
XX
DT   09-SEP-1992 (Rel. 33, Created)
DT   04-MAR-2000 (Rel. 63, Last updated, Version 2)
XX
DE   Rotavirus group B major inner capsid protein mRNA, complete cds.
XX
KW   major inner capsid protein.
XX
OS   group B rotavirus
OC   Viruses; dsRNA viruses; Reoviridae; Rotavirus; Group B rotaviruses.
XX
RN   [1]
RP   1-1271
RX   MEDLINE; 92263761.
RA   Eiden J.J., Nataro J., Vonderfecht S., Petric M.;
RT   "Molecular cloning, sequence analysis, in vitro expression, and
RT   immunoprecipitation of the major inner capsid protein IDIR strain of group
RT   B rotavirus (GBR)";
RL   Virology 188:580-589(1992).
XX
DR   SWISS-PROT; Q01754; VS06_ROTGI.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1271
FT                   /db_xref="taxon:10974"
FT                   /organism="group B rotavirus"
FT                   /strain="IDIR"
FT   CDS             31. .1206
FT                   /codon_start=1
FT                   /db_xref="SWISS-PROT:Q01754"
FT                   /product="major inner capsid protein"
FT                   /protein_id="AAA47348.1"
FT                   /translation="MDLIETVNACVGLQKRVLKLAPNTNLNTAGQSVLNDYNALASRVN
FT                   GRTYALLDQTAVYTPYTVNAPIISLAVRISTDDYDDMRSGIDSILDILAAAIRTEGSRP
FT                   TRVIERRVIEPNVKQLVEDLKLKSLTSEISIANMAAVDTALIQPEIIETENPLFADIIE
FT                   QVIHRPNASMTGGNIRATLGRWSGNKGIVTCMSGMDSEHRFTVDFKTRTCGIINVVYAP
FT                   TAGVIMIPMPTGRNREGHLIDVSAEMMAENFAIDFMDDDDIIQTETGVGVFSFPMCNRI
FT                   RFRINPWDMQKHNDNLWTVNLANWPQGTSPRQPAISFLFETRRTFTEGDYQHLSRCAPK
FT                   VQYMMDTIFPETAFTNRPVVDWNVQSLLTSSSQKTWCQKIAMLIAAYAAKI"
XX
SQ   Sequence 1271 BP; 414 A; 269 C; 288 G; 300 T; 0 other;

M84456  Length: 1271  December 21, 2001 15:56  Type: N  Check: 6338  ..

       1  ggtttaaata gcctaaccag cgtttcaagc atggatctga tcgagactgt
      51  taatgcatgc gttggcttgc aaaaaagagt tttgaaatta gctccaaaca
     101  caaaccttaa cacagcgggt caaagtgtgc tcaacgatta caatgcgcta
     151  gcctcaagag ttaacggtag aacgtacgcg ctactggatc aaacagcggt
     201  atacacaccg tacaccgtca acgccccaat tatttcgctt gctgtacgca
     251  tttcaaccga cgactatgac gacatgcgat ccgggattga ttcaattctg
     301  gacatcttag cagccgccat tagaactgaa ggatcaagac caaccagggt
     351  gatagaaaga agggtgattg aaccaaacgt taaacaattg gtggaagact
     401  tgaaactgaa aagtctaaca tcagaaatat ctatagctaa tatggcagca
     451  gttgatacag ccctaattca gcctgagata attgaaacag aaaatccatt
     501  gtttgctgac ataattgaac aggttattca cagaccaaac gcgagcatga
     551  cgggcggtaa catacgggca actctgggta gatggtcagg aaacaaagga
     601  attgtcactt gtatgtctgg aatggattca gagcacagat ttactgtaga
     651  ctttaagacg agaacatgtg gcatcatcaa cgtagtatac gcaccgacag
     701  cgggagttat catgatacca atgccaactg gtagaaacag agagggacac
     751  ttgatagatg tgtctgctga gatgatggca gaaaatttcg ccatagactt
     801  tatggatgat gacgacatta tacagactga aactggagtg ggagtgttct
     851  cttttccaat gtgtaatagg attagattca gaatcaaccc atgggacatg
     901  cagaaacata acgacaatct ttggacagtt aacctggcta actggccgca
     951  ggggacttct ccgcgacagc cagcaatatc atttctcttt gaaacacggc
    1001  gtacattcac cgaaggggat tatcagcact tgtcacgttg tgctcccaaa
    1051  gtacagtata tgatggacac aatatttcca gaaacagcat tcactaacag
    1101  acccgtagtc gactggaacg ttcaaagtct attgacttct tcaagtcaga
    1151  aaacgtggtg ccagaaaatt gcaatgttga tcgcagcata tgcagccaaa
    1201  atctgattct acgctggctc cgagacacgg agtgcttcgt gaagcgcgaa
    1251  aaattaagca ataaaaaacc c