Sequence of DPV Lily mottle virus
polyprotein precursor [tulip breaking virus, lily, Genomic RNA, 1556 nt].
ACC No: S44147
Dated: 2006-11-14 | Length: 1556 | CRC: -1278361021
ID S44147; SV 1; linear; genomic RNA; STD; VRL; 1556 BP.
XX
AC S44147;
XX
DT 13-JAN-1994 (Rel. 38, Created)
DT 14-NOV-2006 (Rel. 89, Last updated, Version 3)
XX
DE polyprotein precursor [tulip breaking virus, lily, Genomic RNA, 1556 nt].
XX
KW .
XX
OS Tulip breaking virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus.
XX
RN [1]
RC GenBank staff at the National Library of Medicine created this entry [NCBI
RC gibbsq 44147] from the original journal article. This sequence comes from
RC Fig. 2.
RP 1-1556
RX PUBMED; 1677413.
RA Langeveld S.A., Dore J.M., Memelink J., Derks A.F., van der Vlugt C.I.,
RA Asjes C.J., Bol J.F.;
RT "Identification of potyviruses using the polymerase chain reaction with
RT degenerate primers";
RL J. Gen. Virol. 72(Pt 7):1531-1541(1991).
XX
FH Key Location/Qualifiers
FH
FT source 1. .1556
FT /organism="Tulip breaking virus"
FT /mol_type="genomic RNA"
FT /db_xref="taxon:12229"
FT CDS 1. .1350
FT /partial
FT /codon_start=1
FT /gene="polyprotein precursor"
FT /note="This sequence comes from Fig. 2."
FT /db_xref="GOA:Q86537"
FT /db_xref="InterPro:IPR001205"
FT /db_xref="InterPro:IPR001592"
FT /db_xref="InterPro:IPR002345"
FT /db_xref="UniProtKB/TrEMBL:Q86537"
FT /protein_id="AAB19407.1"
FT /translation="EFCKYFVNGDDLLLAVAPEFEYLLDHFANTFQQLGLNYDFSSRTK
FT NREELWFMSHRGIMTDGLYIPKLEPERIVSILEWDRAVEPVHRLEAICASMIEAWGYPQ
FT LLHEIRKFYYWVLEQAPYSELAQLGKAPYLSEVALRALYTGEATSQDELERYLAALNLE
FT GDCSGAEIVAFQANETLNAGASSSTQASRATRPEAAIDVAPQQSSEARVRDRDVDAGTV
FT GTYQIPRLKALATKINVPKVKGRMIVNTGHLVNYNPDQTDISNTRSTQKQFETWYNAVK
FT DEYGLNDESMALAMNGLMVWCIENGTSPNVNGVWLMMDGDQQVEFPLRPILEHAKPTLR
FT QIMAHFSNLAEAYIEKQNLEKPYMPRYGLQRNLTDFNLARFAFDFYEVTSRTPARAKEA
FT HFQMKTAALRGKQSKLFGLDGKVNTQDEDTERHTADDVNKNMHSLLGISM"
XX
SQ Sequence 1556 BP; 440 A; 355 C; 385 G; 376 T; 0 other;
s44147 Length: 1556 14-NOV-2006 Type: N Check: 3219 ..
1 gaattctgta aatactttgt taatggtgat gacctattgc tggcagtggc
51 gcctgagttc gaatacctat tggaccactt tgcgaacact ttccagcaat
101 taggactcaa ctatgacttc tcgtccagaa ccaaaaatag ggaagaacta
151 tggttcatgt cgcaccgtgg gatcatgacg gatggcttgt acataccgaa
201 acttgaaccg gagcgtattg tatccatact ggaatgggac agagcggtgg
251 aaccagtcca caggctggag gcgatctgcg catctatgat tgaggcgtgg
301 ggatacccgc agttgttgca tgaaatcaga aagttctact actgggtgct
351 cgaacaagcc ccttattctg aacttgcaca actcggtaaa gctccatact
401 tatcggaggt cgctcttcgt gcgctgtaca ctggtgaggc aacgagccag
451 gacgagctcg aacgctactt ggcagcctta aacttagaag gtgattgtag
501 tggcgcagag attgtggcgt ttcaggcaaa tgagacactc aatgctggag
551 cttccagttc cacacaagcg agccgagcga ctcgacctga ggctgcaatt
601 gatgtggcac cgcaacagag ttctgaggct agagtgcgtg atcgtgatgt
651 tgatgccggc accgtgggaa cataccaaat cccacgattg aaggcactag
701 caacaaagat caacgtgcct aaggtcaagg ggcgaatgat agtgaacact
751 gggcaccttg tgaattacaa cccagaccaa acagatattt caaatacaag
801 gtcaacccag aagcaatttg agacttggta caacgcagtg aaagatgagt
851 acggtctcaa cgacgagagt atggctctcg caatgaatgg tctgatggtt
901 tggtgcatag agaatggcac ctcaccaaat gtaaatggcg tgtggctcat
951 gatggacgga gatcagcaag ttgaatttcc tttacgtcct atacttgaac
1001 acgcaaaacc gacgctgcgc caaatcatgg cgcacttctc aaatctcgct
1051 gaagcttaca ttgagaagca aaatttggag aagccataca tgcctaggta
1101 tggccttcag cgaaatctca ccgacttcaa tctagcacga ttcgctttcg
1151 atttctatga agtcacttca cgcacgccag cgcgcgcgaa agaagcacac
1201 ttccagatga aaacagccgc cttgcgcggg aaacaatcga agctatttgg
1251 gttagatgga aaggtgaaca cccaagatga ggacacggag aggcatacag
1301 cagacgatgt taataaaaac atgcactcct tacttggaat ttctatgtaa
1351 atcctcgaat aaacagcact agtaacttgc taatatatct acctcgttta
1401 ttccgtagta tcctatcttt tagcccaact ttttgtgtta tagtgtggtt
1451 taccatgaac gcacattgta gttgggaacc gagctccttg ttagtgtcta
1501 gctgcagaga ggttatcctc gcgtcttctt agccactagt cttggaagaa
1551 gggaca