Sequence of DPV Potato virus S

coat protein, 11 kda protein [potato virus S PVS, Genomic RNA, 1346 nt].

ACC No: S45593

Dated: 2004-09-01 | Length: 1346 | CRC: 1304426454

                !!NA_SEQUENCE 1.0
ID   S45593     standard; genomic RNA; VRL; 1346 BP.
XX
AC   S45593;
XX
SV   S45593.1
XX
DT   13-JAN-1994 (Rel. 38, Created)
DT   01-SEP-2004 (Rel. 81, Last updated, Version 3)
XX
DE   coat protein, 11 kda protein [potato virus S PVS, Genomic RNA, 1346 nt].
XX
KW   .
XX
OS   Potato virus S
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Flexiviridae;
OC   Carlavirus.
XX
RN   [1]
RC   GenBank staff at the National Library of Medicine created this entry [NCBI
RC   gibbsq 114637] from the original journal article.
RP   1-1346
RX   MEDLINE; 93033173.
RX   PUBMED; 1413539.
RA   Foster G.D., Mills P.R.;
RT   "The 3'-nucleotide sequence of an ordinary strain of potato virus S";
RL   Virus Genes 6(3):213-220(1992).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1346
FT                   /db_xref="taxon:12169"
FT                   /mol_type="genomic RNA"
FT                   /organism="Potato virus S"
FT   gene            70. .963
FT                   /gene="coat protein, CP"
FT   CDS             70. .963
FT                   /codon_start=1
FT                   /db_xref="GOA:Q86540"
FT                   /db_xref="UniProt/TrEMBL:Q86540"
FT                   /note="conceptual translation presented here differs from
FT                   translation in publication; CP"
FT                   /product="coat protein"
FT                   /gene="11 kda protein"
FT                   /protein_id="AAB23461.2"
FT                   /translation="MPPKPDPTSSGETPQAIPLAPPPRNVYYHRIGPNQGHGQNEEAML
FT                   EQRLIRLIELMASKRHNSTLSNIAFEIGRPSLEPTPEMRRNPENPYSRFSIDELFKMEI
FT                   RSVSNNMANTEQMAQITADIAGLGVPTEHVAGVILKVVIMCASVDSSVYLDPAGTVEFP
FT                   TGAVPLDSIIAIMKNRAGLRKVCRLYAPVVWNYMLVQNRPPSDWQAMGFQWNARCAAFD
FT                   TFDYVTNGAAVQPVEGLIRRPTPEETIAHNAHNAHKSMAIDKSNRNERLANTNVEYTGG
FT                   MLGAEIVRNHRNAINQ"
FT   gene            960. .1244
FT                   /gene="11 kda protein"
FT   CDS             960. .1244
FT                   /codon_start=1
FT                   /db_xref="GOA:Q86541"
FT                   /db_xref="UniProt/TrEMBL:Q86541"
FT                   /gene="11 kda protein"
FT                   /protein_id="AAB23462.1"
FT                   /translation="MKADRLAMLLLCVHRLGYVLPVEVCVNIISLSAGPVSGGRSTYAR
FT                   KRRARSIGRCWRCYRVYPPICNSKCDNRTCRPGISQNYKVVTFIRGWSN"
XX
SQ   Sequence 1346 BP; 388 A; 297 C; 343 G; 318 T; 0 other;

S45593  Length: 1346  September 7, 2004 08:32  Type: N  Check: 1612  ..

       1  aacattgggg ccgttgaagc acctttaggt tcacaggtaa gagttcgaag
      51  aaactgtccc acagagaaaa tgccgccgaa accggatccg acaagctcag
     101  gagaaacacc acaagcgata ccgcttgcgc cgccgccccg gaacgtatat
     151  tatcatagaa ttggcccaaa ccaagggcac gggcaaaatg aagaggctat
     201  gctggagcag aggctcatca gactgattga actcatggcc tcgaaaaggc
     251  acaattcaac attgagcaac atagcttttg agataggtag gccctcactt
     301  gagccaaccc ctgaaatgcg gaggaatccg gagaacccat actcgcggtt
     351  ttcaatcgat gagctgttca agatggaaat ccgatctgtg tccaacaaca
     401  tggcgaacac tgagcaaatg gcacaaatta ctgctgacat cgctggactt
     451  ggggtcccca ctgaacacgt tgcaggggtc atactgaaag tggtgatcat
     501  gtgtgcaagc gtggacagct cagtttatct agatccagca ggaaccgttg
     551  agttcccaac aggcgcagtg cccttggact cgatcattgc aattatgaag
     601  aatcgcgcgg gattgagaaa agtgtgcagg ctgtatgctc cagttgtgtg
     651  gaattacatg ctagtccaga atagaccacc ttcggattgg caggccatgg
     701  gatttcaatg gaatgcacgt tgcgccgcat ttgacacatt tgattatgtg
     751  accaatgggg ctgcagtcca gcccgtagag gggctcatac gcaggcccac
     801  acctgaggaa acaatagctc acaatgccca caatgcccac aagagtatgg
     851  caattgacaa gtcgaacaga aatgagcgat tggccaacac taatgttgag
     901  tacactggag ggatgcttgg cgctgagatt gtgcgcaatc accgtaatgc
     951  gatcaaccaa tgaaggcaga ccgtttagct atgttattat tgtgtgtcca
    1001  tcgactggga tatgttttgc cagttgaagt ttgtgtaaat ataataagcc
    1051  taagcgcagg tccagtttct gggggtcgtt ccacttacgc tcgtaagcgg
    1101  agggcccgca gcattgggcg atgctggcga tgttatcgtg tctatccacc
    1151  tatttgtaat tctaagtgtg ataataggac atgccgtcca ggcattagtc
    1201  aaaattataa agtagtgact ttcattcggg gttggagtaa ctgaggtgat
    1251  accacccatg gtgcaaagtc agagtttcgc ataaaactta aataatatat
    1301  aagtgtgcaa ctataaagaa actatgtttt aaaatatttt atcata