Sequence of DPV Tomato spotted wilt virus
NSM, glycoprotein precursor {M segment} [tomato spotted wilt virus TSWV, Genomic RNA Complete, 4821 nt].
ACC No: S48091
Dated: 2004-09-01 | Length: 4821 | CRC: -1651945217
!!NA_SEQUENCE 1.0
ID S48091 standard; genomic RNA; VRL; 4821 BP.
XX
AC S48091;
XX
SV S48091.1
XX
DT 16-FEB-1993 (Rel. 34, Created)
DT 01-SEP-2004 (Rel. 81, Last updated, Version 4)
XX
DE NSM, glycoprotein precursor {M segment} [tomato spotted wilt virus TSWV,
DE Genomic RNA Complete, 4821 nt].
XX
KW .
XX
OS Tomato spotted wilt virus
OC Viruses; ssRNA negative-strand viruses; Bunyaviridae; Tospovirus.
XX
RN [1]
RC GenBank staff at the National Library of Medicine created this entry [NCBI
RC gibbsq 117699] from the original journal article.
RP 1-4821
RX MEDLINE; 93057351.
RX PUBMED; 1431808.
RA Kormelink R., de Haan P., Meurs C., Peters D., Goldbach R.;
RT "The nucleotide sequence of the M RNA segment of tomato spotted wilt virus,
RT a bunyavirus with two ambisense RNA segments";
RL J. Gen. Virol. 73(Pt 11):2795-2804(1992).
XX
DR GOA; P36292.
DR UniProt/Swiss-Prot; P36292; VNSM_TSWV1.
XX
FH Key Location/Qualifiers
FH
FT source 1. .4821
FT /db_xref="taxon:11613"
FT /mol_type="genomic RNA"
FT /organism="Tomato spotted wilt virus"
FT gene 101. .1009
FT /gene="NSM"
FT misc_feature 101. .1009
FT /note="NSM; mismatches(31) in nucleotide sequence 140-241
FT (amino acids 14-47)"
FT /gene="NSM"
FT gene complement(1330. .4737)
FT /gene="glycoprotein precursor, G1, G2"
FT CDS complement(1330. .4737)
FT /codon_start=1
FT /db_xref="GOA:P36291"
FT /db_xref="UniProt/Swiss-Prot:P36291"
FT /note="G1; G2"
FT /product="glycoprotein precursor"
FT /gene="glycoprotein precursor, G1, G2"
FT /protein_id="AAB24089.1"
FT /translation="MRILKLLELVVKVSLFTIALSSVLLAFLIFRATDAKVEIIRGDHP
FT EIYDDSAENEVPTAASIQREAILETLTNLMLESRTPGTRQIREEKSTIPISAEPTTQKT
FT ISVLDLPNNCLNASSLKCEIKGISTYNVYYQVENNGVIYSCVSDSAEGLEKCDNSLNLP
FT KRFSKVPVIPITKLDKKRHFSVGGKFFISESLTQDNYPITYNSYPTNGTVSLQTVKLSG
FT DCKITKSNFANPYTVSITSPEKIMGYLIKKPGENVEHKVISFSGSASITFTEEMLDGEH
FT NLLCGDKSAKIPKTNKRVRDCIIKYSKSIYKQTACINFSWIRLILIALLIYFPIRWLVN
FT KTTKPLFLWYDLMGLITYPVLLLINCLWKYFPLKCSNCGNLCIVTHECTKVCICNKSKA
FT SKEHSSECPILSKEADHDYNKHKWTSMEWFHLIVNTKLSLSLLKFVTEILIGLVILSQM
FT PMSMAQTTQCLSGCFYVPGCPFLVTSKFEKCSEKDQCYCNVKEDKIIESIFGTNIVIEG
FT PNDCIENQNCIARPSIDNLIKCRLGCEYLDLFRNKPLYNGFSDYTGSSLGLTSVGLYEA
FT KRLRNGIIDSYNRQGKISGMVAGDSLNKNETSIPENILPRQSLIFDSVVDGKYRYMIEQ
FT SLLGGGGTIFMLNDKTSETAKKFVIYIKSVGIHYEVSEKYTTAPIQSTHTDFYSTCTGN
FT CDTCRKNQALTGFQDFCVTPTSYWGCEEAWCFAINEGATCGFCRNIYDMDKSYRIYSVL
FT KSTIVADVCISGILGGQCSRITEEVPYENTLFQADIQADLHNDGITIGELIAHGPDSHI
FT YSGNIANLNDPVKMFGHPQLTHDGVPIFTKKTLEGDDMSWDCAAIGKKSVTIKTCGYDT
FT YRFRSGLEQISDIPVSFKDFSSFFLAKSFSLGKLKMVVDLPSDLFKVAPKKPSITSTSL
FT NCNGCLLCGQGLSCLLEFFSDLTFSTAISIDACSLSTYQLAVKKGSNKYNITMFCSANP
FT DKKKMTLYPEGNPDISVEVLVNNVIVEEPENIIDQNDEYAHEEQQYNSDSSAWGFWDYI
FT KSPFNFIASYFGSFFDTIRVVLLIAFIFLVTYFCSILTSICKGYVKNESYKSRSKIEDD
FT DEPEIKAPMLMKDTMTRRRPPMDFSHLV"
XX
SQ Sequence 4821 BP; 1532 A; 870 C; 850 G; 1569 T; 0 other;
S48091 Length: 4821 September 7, 2004 08:32 Type: N Check: 6302 ..
1 agagcaatca gtgcatcaga aatataccta ttatacattt tgctaagaat
51 caatcaacta cattacacaa gctcctctac cttaggctgt tgaactcgaa
101 atgttgactc ttttcggtaa caagaggcct tctaagtctg taatggcagt
151 gttgaagtct caaaaccatg gtcttcttct gatgaaaagc ttgctttaac
201 ccggaaagga tgaaggtcct ttagtttcac ttgctaaaca caaagccatg
251 gatgcatcca aaggaaagat actgttaaac attgagggaa catcttcctt
301 tggaacctat gaatctgatt ccatcacaga gtcagaaggt tatgatcttt
351 ctgctagaat gatagtagat acaaaccatc atatctcaaa ctggaaaaat
401 gatctttttg ttggcaacgg aaagcaaaat gctaataagg ttatcaagat
451 ctgtccgact tgggacagca gaaaacaata catgatgatt tccagaattg
501 tgatatgggt ctgccccact ataccaaacc ctacaggaaa acttgtggtt
551 gctttaattg atcccaacat gccatctgga aagcaagtca tcctgaaggg
601 tcaggggaca ataactgatc ctatctgctt tgttttttat ctgaactggt
651 ctattccgaa gatgaacaac accccagaaa actgttgtca gctgcatttg
701 atgtgtagcc aagaatacaa gaaaggggtt tcttttggta gtgtcatgta
751 ttcttggaca aaagagtttg gtgattcacc cagagctgat aaagacaaaa
801 gttgtatggt tatacctcta aacagggcca ttagagctag atctcaggca
851 ttcattgaag cctgcaagct gataattcct aaaggaaaca gtgagaagca
901 gataaaaaaa cagcttaaag aactgagctc aaatcttgag agatcagttg
951 aagaggaaga ggaaggaatt tctgacagtg ttgctcagtt atcctttgat
1001 gaaatatagt tctttaaata tcacttattt aagcttaaat ttctgtctat
1051 tttgcatttt gaatccaaaa acccaaacaa aaaacgaaaa caaaaaagag
1101 aaaaaaacaa aaaatcaaac caaaaaacaa aaacaaaata aggctgaaaa
1151 gcaaactttg gtccgaagac tttttttgtt gttttttgtt tatttttatt
1201 tttttgtttg ttttttgttt attttatatt tcgtttttat tagttaatga
1251 ttgattttaa agatttttct atatatataa tcctgctaat atagaagatt
1301 gaatcaaatt taatctgtga caagcatctt cagacaaggt gagagaaatc
1351 cataggtggc cttcttcttg tcattgtatc tttcattaac ataggggctt
1401 tgatctcagg ttcatcatca tcctctatct tggatctaga tttataagat
1451 tcattcttta catatccttt acaaatggat gtcagaatag aacagaaata
1501 agtcacaaga aaaatgaatg caataagcag taccactctg atagtatcaa
1551 aaaatgagcc aaagtaactt gcaatgaaat tgaatggact cttaatataa
1601 tcccagaagc cccatgctga agaatcagaa ttatattgtt gttcttcatg
1651 agcatactca tcattttgat ctattatatt ctctggttct tctacaataa
1701 cattattaac caaaacttcc acagagatat ccggattgcc ttctggatac
1751 aatgtcattt tcttcttgtc cggattggct gaacaaaaca ttgttatatt
1801 gtatttatta gatccttttt taacagctag ctgataagta gataaagagc
1851 aagcatctat agaaattgca gtagaaaatg tcaaatctga gaaaaattct
1901 aaaaggcaag ataaaccttg gccgcataga agacagccat tgcaatttaa
1951 gcttgttgaa gttatggaag gtttcttagg agcaacttta aaaagatcag
2001 atggaagatc aactaccatt ttcagtttcc ctagactaaa agattttgcc
2051 agaaaaaaac tagaaaaatc tttgaaacta acaggaatat ctgatatttg
2101 ctctaaacca gatctaaacc tgtatgtgtc gtatccacat gttttgatag
2151 tgactgattt tttccctatt gctgcacaat cccaagacat gtcatctcct
2201 tctagagttt tcttagtaaa aataggcact ccatcatggg tcaattgtgg
2251 atgaccaaac attttcacag gatcattcaa gtttgcaata tttccagagt
2301 aaatatgact gtcgggtcca tgagctatta gttcacctat agtgatacca
2351 tcattatgca aatctgcttg tatatcagct tgaaacaatg tattttcata
2401 aggaacctct tcagtaatcc ttgagcattg acctcccaaa ataccggaaa
2451 tacaaacatc tgctactata gttgacttaa gcactgaata aattctgtat
2501 gatttgtcca tatcataaat atttcgacag aatccgcatg tagcaccctc
2551 attaattgca aaacaccaag cttcttcaca tccccaataa gaagttggtg
2601 ttacacaaaa atcttggaaa cctgttaaag cttgattttt cctgcaagtg
2651 tcgcagtttc ctgtacaagt ggaataaaaa tccgtgtggg tgctttggat
2701 gggagctgtc gtatattttt ctgacacttc ataatgaatt cccacacttt
2751 tgatataaat cacaaatttt ttggctgttt ctgaggtctt gtcatttagc
2801 atgaatatag ttcctcctcc tcctaaaaga gattgttcta tcatatatct
2851 atatttcccg tctacaacag aatcaaagat taatgattgc ctgggcagaa
2901 tgttctctgg tatgcttgtt tcgtttttgt ttaaggagtc tccggcaacc
2951 attccagaaa ttttgccctg acggttatag gaatctatta taccatttct
3001 caatctctta gcctcataca gaccaactga tgttaaccct aaagagcttc
3051 ctgtataatc cgaaaaccca ttgtacaaag gtttgtttcg gaataaatct
3101 aggtattcgc aacctaatct gcattttata agattatcaa tagatgggcg
3151 tgcaatgcaa ttctggttct ctatgcaatc attaggacct tctataacaa
3201 tattagtgcc aaagatactc tctatgatct tatcttcttt tacattgcag
3251 taacattgat ctttttcaga gcatttttca aatttgcttg taaccaaaaa
3301 tggacagcct ggaacataaa agcatccact caaacattgg gttgtttgag
3351 ccatagacat gggcatctga gacaaaatga ctaaacctat caaaatttcg
3401 gtcacaaatt ttagcaaact caagctcagc ttagtgttca ctattagatg
3451 gaaccattcc atgctagtcc acttatgttt gttgtagtca tgatctgctt
3501 ctttggatag tatgggacac tctgaagaat gctcttttga agctttgctt
3551 ttgttgcaaa tgcagacttt agtacactca tgtgtgacta tgcacagatt
3601 gccgcagtta gaacatttta atgggaaata tttccataag caatttatga
3651 gcaataagac agggtatgta atcaagccca taagatcata ccagagaaag
3701 agaggtttag tcgtcttgtt cactaaccat cggataggga aatagatcaa
3751 caaagctatc aatatcaacc ttatccaaga aaaattgatg caggctgttt
3801 gcttataaat actttttgaa tatttgatta tgcaatctct gactcttttg
3851 tttgtttttg gtattttggc tgatttgtca ccacacaaga gattgtgttc
3901 accatccaac atttcctcag taaaagtgat acttgctgat ccagaaaaag
3951 atataacctt gtgttccaca ttttcaccag gtttttttat caaataaccc
4001 atgatcttct cagggctagt gatgcttaca gtatagggat ttgcgaagtt
4051 tgatttagtt attttgcagt caccggataa ctttacagtt tgtaatgata
4101 ctgttccatt agtggggtat gagttgtaag ttataggata attatcttgt
4151 gtcaggcttt ctgaaatgaa gaattttcct cctactgaaa agtgtctttt
4201 cttgtctagc ttggtaatgg gaataaccgg gactttggag aatctctttg
4251 gcaaatttaa agaattatca catttttcta aaccttctgc tgaatcagaa
4301 acacaggaat atatgacacc attgttttca acttgataat aaacattata
4351 agtggatatc ccttttatct cacattttaa tgaagaagca ttcaagcaat
4401 tgttgggaag atccaaaaca gagattgttt tttgcgttgt tggctcagca
4451 gaaataggga tggttgattt ttcttctcgt atctgacggg ttccaggagt
4501 ccgagattct agcatcagat tagttaaagt ctctaagata gcttcgcgtt
4551 gaatcgatgc agcagtgggt acctcattct cagcagaatc atcataaatc
4601 tcaggatgat ctccacgaat tatttctact ttagcatctg tggctctgaa
4651 gatcaagaat gccaacaaaa cagaactcag ggcaattgtg aaaagactca
4701 cttttaccac tagttctagt agttttagaa ttctcatctt agatgtctac
4751 ccagattaca atggttgtgt gattaatttc aagatgtctg gattaaggtt
4801 tttgtttgca ctgattgctc t