Sequence of DPV Potato virus Y

cytoplasmic inclusion protein [potato virus Y PVY, necrotic strain PVY-T13, Genomic RNA, 1902 nt].

ACC No: S51664

Dated: 2003-04-22 | Length: 1902 | CRC: -1761243023

                !!NA_SEQUENCE 1.0
ID   S51664     standard; RNA; VRL; 1902 BP.
XX
AC   S51664;
XX
SV   S51664.1
XX
DT   10-MAR-1993 (Rel. 35, Created)
DT   22-APR-2003 (Rel. 75, Last updated, Version 5)
XX
DE   cytoplasmic inclusion protein [potato virus Y PVY, necrotic strain PVY-T13,
DE   Genomic RNA, 1902 nt].
XX
KW   .
XX
OS   Potato virus Y
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RC   GenBank staff at the National Library of Medicine created this entry [NCBI
RC   gibbsq 121708] from the original journal article. This sequence comes from
RC   Fig. 2.
RP   1-1902
RX   MEDLINE; 93119268.
RX   PUBMED; 8418790.
RA   Ohshima K., Inoue A.K., Shikata E.;
RT   "Molecular cloning, sequencing, and expression in Escherichia coli of the
RT   potato virus Y cytoplasmic inclusion gene";
RL   Arch. Virol. 128(1-2):15-27(1993).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1902
FT                   /db_xref="taxon:12216"
FT                   /mol_type="genomic RNA"
FT                   /organism="Potato virus Y"
FT   CDS             <1. .>1902
FT                   /codon_start=1
FT                   /note="This sequence comes from Fig. 2"
FT                   /product="cytoplasmic inclusion protein"
FT                   /protein_id="AAP13887.1"
FT                   /translation="SLDDVVKNFDERNEVIDFELNEDTIKTSSVLDTKFSDWRDRQIQM
FT                   GHTLPHYRTEGHFMEFTRATAVQVANDIAHSEHLDFLVRGAVGSGKSTGLPVHLSAAGS
FT                   VLLIEPTRPLAENVFKQLSSEPFFKKPTLRMRGNSVFGSSPISIMTSGFALHYYANNRS
FT                   QLTQFNFIIFDECHVLDPSAMAFRSLLSVYHQTCKVLKVSATPVGREVEFTTQQPVKLV
FT                   VEDTLSFQSFVDPQGSKTNADVVQHGSNILVYVSSYNEVDALAKLLTDRNMLVSKVDGR
FT                   TMKHGCLEIVTKGTSAKPHFVVATNIIENGVTLDIDVVVDFGLKVSPFLDIDNRSIAYN
FT                   KISVSYGERIQRLGRVGRFKKGVALRIGHTEKGIIEIPSMIASEAGLACFAYNLPVMTG
FT                   GVSTSLIGNCTVRQVKTMQQFELSPFFIQNFVAHDGSMHPVIHDILKKYKLRDCMTALC
FT                   DQSIPYRASSTWLSVGEYERLGVVLDIPKQIKIAFHIKDIPLKLHEMLWETVIKYKDVC
FT                   LFPSIRASSISKIAYTLRTDLFAIPRTLILVERLLEEERVKQSQFRSLIDEGCSSMFSI
FT                   VNLTNTLRARYAKDYTAENIQKLEKVRSQLKEFSNLSGSACEENLMKRYESLQFVHHQ"
XX
SQ   Sequence 1902 BP; 574 A; 347 C; 434 G; 547 T; 0 other;

   S51664  Length: 1902  May 13, 2003 09:00  Type: N  Check: 9066  ..

       1  tccttggatg atgtagttaa gaatttcgat gaaaggaacg aagttattga
      51  ttttgagcta aatgaggata caattaaaac atcatcagtg ttggatacaa
     101  agtttagcga ctggagggat cggcaaatcc aaatgggaca cacacttccc
     151  cactatagaa ctgagggaca cttcatggaa ttcacaaggg caactgctgt
     201  gcaagtggcc aatgatatcg cgcatagtga gcacctagat tttctagtga
     251  ggggagctgt tgggtctgga aaatctactg gactgcctgt tcatctcagc
     301  gcagccggat ccgtgctttt gatagaacca actcgaccac ttgcagaaaa
     351  cgtgttcaag cagttatcca gtgaaccgtt tttcaagaag ccaacactgc
     401  gcatgcgagg aaatagtgtg tttggttcct ctccaatttc catcatgact
     451  agcggctttg cgttgcacta ctatgctaat aatcgctctc agctaactca
     501  gtttaatttc ataatttttg atgaatgtca tgttctagat ccttctgcaa
     551  tggcatttcg tagcttgtta agtgtgtatc accaaacatg caaagtgtta
     601  aaggtatcag ccactccagt gggaagggag gtcgagttca caacacaaca
     651  accagttaaa ttagtggttg aggatacact ttcattccaa tcttttgttg
     701  atccccaagg ctcaaaaact aatgccgacg ttgttcagca tggttcgaac
     751  atactcgtgt atgtgtcgag ttacaatgaa gtggatgcat tagccaagct
     801  tctaacggat aggaatatgc ttgtctcaaa agttgatggc agaacaatga
     851  agcacggatg cttagaaatt gtaacgaaag ggactagtgc aaagccacat
     901  tttgtcgtag caaccaacat tattgaaaat ggagtaactt tagatataga
     951  tgtagttgta gattttgggc ttaaagtctc accgttttta gatattgaca
    1001  ataggagcat tgcatacaat aagattagtg ttagctatgg agaaagaatt
    1051  cagaggttgg gtcgtgttgg ccgctttaag aagggagtgg cattgcgtat
    1101  tgggcacacc gaaaagggaa ttattgagat tccaagtatg attgctagtg
    1151  aagctgggct tgcgtgcttt gcatacaatt tgccagtaat gacagggggt
    1201  gtttcaacta gcctgattgg caattgtact gttcgtcaag ttaaaactat
    1251  gcaacaattt gagctgagtc cattctttat acaaaatttt gttgcccatg
    1301  atggatcaat gcatcctgtc atacatgaca ttcttaagaa gtataaactg
    1351  cgagattgta tgacggcctt gtgtgatcaa tcaatacctt acagagcctc
    1401  aagcacttgg ttgtctgttg gtgagtacga acgactcgga gtggttttgg
    1451  acattccaaa acagatcaag attgcattcc acatcaagga catccctctt
    1501  aagttgcatg aaatgctttg ggaaacagtt attaaatata aggatgtgtg
    1551  tttgtttcca agtattcggg cttcatccat tagcaaaatt gcatacacac
    1601  tgcgcactga tctttttgca atccccagaa ccctaattct agttgaaaga
    1651  ttgctcgagg aggaacgagt gaaacagagc caatttagaa gtctcattga
    1701  tgaaggatgc tcaagtatgt tttcaattgt taatttaaca aacactctta
    1751  gagctagata tgcaaaggat tacactgcag aaaacataca gaagctcgag
    1801  aaagtgagga gtcagttaaa ggagttctca aatttaagtg gctctgcatg
    1851  cgaggagaac ttaatgaaga ggtatgaatc tctacagttt gtgcatcatc
    1901  aa