Sequence of DPV Chrysanthemum virus B
ORF1...ORF6 {3' terminal reigon} [chrysanthemum virus B CVB, Genomic RNA, 6 genes, 3426 nt].
ACC No: S60150
Dated: 2004-09-01 | Length: 3426 | CRC: -2031436436
!!NA_SEQUENCE 1.0
ID S60150 standard; genomic RNA; VRL; 3426 BP.
XX
AC S60150;
XX
SV S60150.1
XX
DT 13-JAN-1994 (Rel. 38, Created)
DT 01-SEP-2004 (Rel. 81, Last updated, Version 3)
XX
DE ORF1. . .ORF6 {3' terminal reigon} [chrysanthemum virus B CVB, Genomic RNA, 6
DE genes, 3426 nt].
XX
KW .
XX
OS Chrysanthemum virus B
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Flexiviridae;
OC Carlavirus.
XX
RN [1]
RC GenBank staff at the National Library of Medicine created this entry [NCBI
RC gibbsq 60150] from the original journal article.
RP 1-3426
RX MEDLINE; 92013948.
RX PUBMED; 1919520.
RA Levay K., Zavriev S.;
RT "Nucleotide sequence and gene organization of the 3'-terminal region of
RT chrysanthemum virus B genomic RNA";
RL J. Gen. Virol. 72(Pt 10):2333-2337(1991).
XX
FH Key Location/Qualifiers
FH
FT source 1. .3426
FT /db_xref="taxon:12165"
FT /mol_type="genomic RNA"
FT /organism="Chrysanthemum virus B"
FT gene <1. .787
FT /gene="ORF1"
FT CDS <1. .787
FT /codon_start=2
FT /db_xref="GOA:P37987"
FT /db_xref="UniProt/Swiss-Prot:P37987"
FT /note="RNA replicase homolog; conceptual translation
FT presented here differs from translation in publication"
FT /gene="ORF6"
FT /protein_id="AAB20076.2"
FT /translation="PPYMRYIEAKLHEVLPSRFYIHSGKGLEELNEWVIKGKFEGICTE
FT SDYEAFDASQDQYIVAFELALMEYLGLPRDLIEDYAFIKCHLGSKLGNFAIMRFSGEAS
FT TFLFNTMANMLFTFLRYNIKDSEHICFAGDDMCASERLCIKKEHEGFLNKLKLKAKVFF
FT VDKPTFCGWHLCPDGIYKKPQLVLERMCIAKEKNNLANCLDNYAIEVSYAYKLGERAVN
FT RMDEEELEAAYNCVRIIIKNKKLLKSDILGFYSNIEKQI"
FT gene 785. .1513
FT /gene="ORF2"
FT CDS 821. .1516
FT /codon_start=1
FT /db_xref="GOA:P37988"
FT /db_xref="UniProt/Swiss-Prot:P37988"
FT /note="ORF2"
FT /gene="ORF6"
FT /protein_id="AAB20077.1"
FT /translation="MDVFVKILSDFGFTRLSSSLHVPIVVHCMPGAGKSSCIRALLKAD
FT SRFVAYTLGVPDPCNLDGLCIKAFTGSVDLKYFNILDEYARYNGDASDFFALFGDPVQS
FT PPRNLYRAHFKAVLSKRFGSCTAQLLRELGFEVESTKEDLVSIRGLYDFDPVGTVIYYE
FT KEIGCLLRAHSIEAYEPEEVVGKTFETVTFVTAENHIPAESRHLVYQCLTRHRSVLHLM
FT TPDASYTST"
FT gene 1494. .1814
FT /gene="ORF3"
FT CDS 1494. .1814
FT /codon_start=1
FT /db_xref="GOA:P37989"
FT /db_xref="UniProt/Swiss-Prot:P37989"
FT /note="ORF3; conceptual translation presented here differs
FT from translation in publication"
FT /gene="ORF6"
FT /protein_id="AAB20078.2"
FT /translation="MPLTPPPDHTKVLLVAAIGLSIVASILTYSRNTLPQVGDHSHLLP
FT HGGVYKDGTKTIVYGGPRKLNSLEGGFNLPVQPWFLVILLSAAIFLLSCRSGHRRVCGQ
FT CH"
FT gene 1805. .2025
FT /gene="ORF4"
FT CDS 1805. .1999
FT /codon_start=1
FT /db_xref="GOA:P37990"
FT /db_xref="UniProt/Swiss-Prot:P37990"
FT /note="ORF4"
FT /gene="ORF6"
FT /protein_id="AAB20079.1"
FT /translation="MSLSYLDLLLAFGCVLAVSVIVNCFLVSHNNCVIEITGEAVRISG
FT CTFDRTFVELVKGLKPARH"
FT gene 2026. .3007
FT /gene="ORF5"
FT CDS 2054. .3001
FT /codon_start=1
FT /db_xref="GOA:P37991"
FT /db_xref="UniProt/Swiss-Prot:P37991"
FT /product="coat protein"
FT /gene="ORF6"
FT /protein_id="AAB20080.1"
FT /translation="MPPKPAPGDNEGNASGSTPTPPPPPPARTAEEARLRLAEMERERE
FT QEQLLEEMNSNTPAEDARNISRLTQLAALLRREQTNVHVTNMALEIGRPALQPPPNMRG
FT DPTNMYSQVSSDFLWKIKPQRISNNMATSEDMVKIQVALEGLGVPTESVKEVIIRLVLN
FT CANTSSSVYQDPKGVIEWDGGAIIADDVVGVITKHSTLRKVCRLYAAVAWNYMHLQQTP
FT PSDWSAMGFHPNVKYAAFDFFDYVENGAAIRPSGGIVPKPTRAEYVAYNTYKMLALNKA
FT NNNDTFGNFDSAITGGRQGPAIHNNLNNANNKTL"
FT gene 3017. .3426
FT /gene="ORF6"
FT CDS 3017. .3340
FT /codon_start=1
FT /db_xref="GOA:P37992"
FT /db_xref="UniProt/Swiss-Prot:P37992"
FT /gene="ORF6"
FT /product="basic protein with putative zinc finger motif"
FT /protein_id="AAB20081.1"
FT /translation="MDVIVKMLILRKFVEQGNVCPIHLCVDIYKRAFPRSVNKGRSSYA
FT RRRRALELGRCHRCYRVYPPLFPEISRCDNRTCVPGISYNSKVRDYILWGVTEVIPHPG
FT YNF"
XX
SQ Sequence 3426 BP; 928 A; 670 C; 827 G; 1001 T; 0 other;
S60150 Length: 3426 September 7, 2004 08:32 Type: N Check: 5662 ..
1 cccgccctac atgcgctata ttgaggcgaa acttcatgag gttctgccca
51 gcagattcta catacactca gggaagggat tagaagagct taatgagtgg
101 gttatcaaag gtaagttcga gggcatttgc acagaatcag attatgaagc
151 cttcgatgct tcacaggatc agtacatagt tgcttttgaa ttagctctaa
201 tggagtattt ggggttgcca agggatttaa ttgaggatta cgctttcatc
251 aagtgccatt tgggttccaa gttaggcaac tttgccatca tgcgattctc
301 tggggaggct agtactttcc tgtttaacac aatggctaac atgttattca
351 ccttcttgcg ctacaacatt aaagatagtg agcacatttg cttcgcagga
401 gatgacatgt gtgcctcaga gcgcctatgc atcaagaaag agcatgaagg
451 ttttttaaat aaattaaaat tgaaggcaaa agtgttcttt gtggataaac
501 cgactttttg tggatggcac ctatgtcctg atggcatata taaaaagcct
551 caattagtgc tagaacgtat gtgtattgcc aaggagaaga ataatttggc
601 caattgttta gataattatg caattgaggt ctcatacgca tacaaacttg
651 gtgaacgggc tgtcaatagg atggatgaag aagagttgga agcagcttac
701 aactgtgtcc ggataattat taaaaataag aaactcttaa agtccgacat
751 acttgggttc tattccaaca ttgaaaaaca aatttaaaat acgcttaggt
801 tgtagctata ggattgttat atggatgtgt ttgtaaagat tttgagtgat
851 tttggtttta cacgtttaag tagtagctta catgtgccta ttgttgtcca
901 ctgtatgcca ggagctggga agagtagttg tattcgagca ttattaaaag
951 ctgattcaag gttcgtggcg tacactttag gtgttcctga tccttgcaat
1001 ttggacggtt tgtgcatcaa agcatttacc gggtctgttg atcttaagta
1051 tttcaatatc cttgacgaat acgctcgcta caacggtgac gctagcgatt
1101 tctttgcact ctttggtgat ccagttcaga gccctccgcg caatttatac
1151 agggcccatt tcaaggcagt gcttagcaag cggtttggta gttgcactgc
1201 gcaattactc cgagagcttg gatttgaggt tgagagcaca aaagaggact
1251 tagttagcat ccgagggttg tacgactttg atcccgtagg tacggttatc
1301 tactacgaaa aggaaatagg ttgtttattg agagcccatt ccattgaagc
1351 ctacgaacct gaagaggtcg tcgggaagac gtttgaaacg gtcaccttcg
1401 taactgctga aaaccatata cctgcagaat ctagacactt ggtttaccag
1451 tgtctcacac gacaccgctc agtgttacat cttatgactc ctgatgcctc
1501 ttacacctcc acctgatcac acgaaagttc tccttgttgc ggccattggc
1551 ttgagtattg tcgcatctat attgacttac agcaggaata cacttcctca
1601 agtcggtgac cattcacatc tgttgccgca cggtggtgtg tacaaagacg
1651 ggacaaagac tatcgtttac ggaggcccta ggaaactgaa ttctctagag
1701 ggtggattta acttaccagt gcagccttgg ttccttgtta tactattaag
1751 tgcagccatt ttcttgctta gttgtcgtag tgggcaccgt agggtctgtg
1801 gtcaatgtca ttaagttact tagatttact tttagctttt gggtgtgttc
1851 tggctgttag cgttattgta aattgctttt tggttagtca taataattgc
1901 gtgattgaaa taactggtga agctgtgagg atttctggtt gcaccttcga
1951 taggactttc gtcgaactgg ttaaagggct caagccggct aggcattagt
2001 gatactctta ggtttgtgag tggttagatc gttatatttg aattttagtc
2051 actatgcctc ccaaaccggc accaggtgat aatgaaggta acgcaagtgg
2101 gtccacacca actccacctc cacccccacc agcacgaacc gcggaagagg
2151 cgaggttgag gcttgcagag atggaacgag agcgtgagca ggagcaattg
2201 ctagaggaga tgaactccaa caccccagct gaggatgcca ggaacataag
2251 ccgtctgaca caactcgctg cgctactgag gagagagcag acgaatgtgc
2301 acgttacgaa catggctttg gagataggta ggcctgcact ccagcctcca
2351 cctaatatgc gaggggatcc aactaatatg tacagccagg tgtcttccga
2401 tttcctgtgg aagattaaac cacagaggat ttctaataac atggcaacat
2451 ctgaggatat ggtgaagata caagtggccc ttgaaggctt gggggtacct
2501 accgaatcag tcaaagaggt gatcatccgt ctagtgctca attgtgcgaa
2551 taccagcagt tccgtttacc aggatccaaa gggggtaatc gagtgggatg
2601 gtggagcgat tattgccgac gatgtcgtag gggttattac taaacacagc
2651 acccttagga aagtgtgccg tctctatgca gctgtggcat ggaactacat
2701 gcatttacaa cagaccccac cttctgattg gtcggctatg ggctttcatc
2751 caaatgttaa gtatgctgcc tttgatttct tcgactatgt cgaaaatgga
2801 gctgcaatca gaccaagtgg tggcattgtg cctaaaccca cacgtgcgga
2851 gtatgtggcg tacaatactt acaagatgtt agctctcaat aaggccaaca
2901 acaatgatac ctttggcaat ttcgattctg ccattacggg tgggagacaa
2951 ggaccggcta ttcacaacaa tctgaacaat gcgaataata agacattata
3001 aagtagtagt tgatatatgg atgtgattgt gaagatgcta atcctacgta
3051 agtttgttga acagggtaat gtatgcccta ttcatttgtg tgttgatatt
3101 tacaagcgtg ctttccctag gagtgtgaat aaaggtagat cttcatacgc
3151 tagacgtcgc cgagctctag agcttggtcg gtgtcatagg tgttacaggg
3201 tctaccctcc tttgtttccc gagatttcta ggtgcgataa tcgcacttgt
3251 gtgcctggta tttcttataa tagtaaagtg agagattata tcctttgggg
3301 agtaaccgag gtgatacccc accctgggta taatttctaa agtagtagct
3351 gcttctaaag cctaaataat atatatggtt gtagctttaa aaaatcagtg
3401 agttttaata tatttttcct tactta