Sequence of DPV Sugarcane mosaic virus
Maize dwarf mosaic virus polyprotein gene, partial cds.
ACC No: S77088
Dated: 2004-09-01 | Length: 1279 | CRC: -1066183066
!!NA_SEQUENCE 1.0
ID S77088 standard; genomic RNA; VRL; 1279 BP.
XX
AC S77088;
XX
SV S77088.1
XX
DT 04-AUG-1995 (Rel. 44, Created)
DT 01-SEP-2004 (Rel. 81, Last updated, Version 3)
XX
DE Maize dwarf mosaic virus polyprotein gene, partial cds.
XX
KW .
XX
OS Maize dwarf mosaic virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus.
XX
RN [1]
RC GenBank staff at the National Library of Medicine created this entry [NCBI
RC gibbsq 164351] from the original journal article. This sequence comes from
RC Fig. 2.
RP 1-1279
RX MEDLINE; 95283714.
RX PUBMED; 7766313.
RA Sai J., Kang L., Huang Z., Shi C., Tian B., Xie Y.;
RT "Nucleotide sequence of maize dwarf mosaic virus capsid protein gene and
RT its expression in Escherichia coli";
RL Sci. China, Ser. B, Chem. Life Sci. Earth Sci. 38(3):313-319(1995).
XX
FH Key Location/Qualifiers
FH
FT source 1. .1279
FT /db_xref="taxon:12203"
FT /mol_type="genomic RNA"
FT /organism="Maize dwarf mosaic virus"
FT CDS <1. .1023
FT /codon_start=1
FT /db_xref="GOA:Q86893"
FT /db_xref="UniProt/TrEMBL:Q86893"
FT /note="sequence in paper in conflict with conceptual
FT translation; mismatches
FT (9[A->F],162[A->F],215[A->F],235[A->F])"
FT /product="polyprotein"
FT /protein_id="AAB34457.2"
FT /translation="EIEKYFKQFAKDLPGYIEDYNEDVFHQSGTVGAGAQGGGSGSGTT
FT PPATGSGTGTRTPSTGTPAQGNTPPASGGSSGNNGGGQSGSNGTGGQAGSSGAGGQRDK
FT DVDAGSTGKISVPKLKAMSKKMRLPKAKGKDVLHLDFLLTYKPQQQDISNTRATKEEFD
FT RWYDAIKKEYEIDDTQMTVVMSGLMVWCIENGCSPNINGNWTMMDGDEQRVFPLKPVIE
FT NASPTFRQIMHHFSDAAEAYIEYRNSTERYMPRYGLQRNLTDYSLARYAFDFYEMTSRT
FT PARAKEAHMQMKAAAVRGSNTRLFGLDGNVGETQENTERHTAGDVSRNMHSLLGVQQHH
FT "
FT mat_peptide <1. .81
FT /note="nuclear inclusion protein"
FT /product="NIb"
FT mat_peptide 82. .1020
FT /note="capsid protein"
FT /product="CP"
XX
SQ Sequence 1279 BP; 392 A; 269 C; 331 G; 287 T; 0 other;
S77088 Length: 1279 September 7, 2004 08:32 Type: N Check: 1340 ..
1 gagattgaga aatatttcaa acagtttgcc aaagatctcc ctggttatat
51 agaagattac aacgaagatg ttttccatca atccggaact gtgggtgcag
101 gagcccaagg agggggaagt ggatctggaa caacgccacc agcaacaggt
151 agtggtacag gaacaagaac accatctact ggaactccag cacaaggcaa
201 cacacctcca gcatcaggtg gatcatcagg aaacaatgga ggcggccaat
251 caggttcaaa cggcactgga ggccaagcag gttcaagcgg agcagggggt
301 caaagagaca aagacgttga cgctggctca acagggaaga tatcagtgcc
351 aaagcttaag gcaatgtcga agaaaatgcg cctgccaaag gcgaaaggaa
401 aagacgtttt acacttagat ttcctgttaa catataaacc acaacagcaa
451 gatatatcaa atactagagc aactaaggaa gagtttgata gatggtatga
501 tgccataaag aaggagtacg aaattgatga cacacaaatg acagttgtca
551 tgagtggtct catggtatgg tgcatcgaaa atggttgctc accaaacata
601 aacggaaatt ggacgatgat ggacggagac gaacaaaggg tttttccatt
651 aaagccagtt attgagaacg catctccaac tttccgacag ataatgcatc
701 attttagtga tgcagctgaa gcgtatatag agtaccgaaa ctctacagag
751 cgatacatgc caagatacgg tcttcagcga aatctcaccg actatagctt
801 agcgcggtat gctttcgatt tctatgaaat gacttcgcgg acaccagcta
851 gagctaagga agcccacatg cagatgaaag ccgcagcagt tcgtggttcg
901 aacacacgtc tgttcggtct ggacggaaat gtcggcgaga ctcaggagaa
951 tacagagaga cacacagctg gcgacgttag tcgcaacatg cactctttgt
1001 tgggagtgca gcagcaccac tagtctcctg gaaaccctgt ttgcagtacc
1051 tatagtatat tactaaatag tacgttcgcg aggccttgcc tcgtgtgtat
1101 gtgaggttct acctcgtatt tactatttca gtatatgtac ttttagcgtg
1151 aaccagtctg caggacacag ggttggaccc agtgtcttct ggtgtagcgt
1201 gtactagcgt cgagccaatg gacggacggc actgggagtg gttttaccat
1251 tggtgctgcg agtctcttgg tgagagaca