Sequence of DPV African horse sickness virus

African horse sickness virus serotype 9 nonstructural protein (NS1) gene, complete cds.

ACC No: U01069

Dated: 2000-03-04 | Length: 1748 | CRC: -231832990

                !!NA_SEQUENCE 1.0
ID   REU01069   standard; RNA; VRL; 1748 BP.
XX
AC   U01069;
XX
SV   U01069.1
XX
DT   08-MAR-1994 (Rel. 38, Created)
DT   04-MAR-2000 (Rel. 63, Last updated, Version 2)
XX
DE   African horse sickness virus serotype 9 nonstructural protein (NS1) gene,
DE   complete cds.
XX
KW   .
XX
OS   African horse sickness virus
OC   Viruses; dsRNA viruses; Reoviridae; Orbivirus;
OC   African horse sickness group.
XX
RN   [1]
RP   1-1748
RA   Nel L.H.;
RT   ;
RL   Unpublished.
XX
RN   [2]
RP   1-1748
RA   Nel L.H.;
RT   ;
RL   Submitted (26-AUG-1993) to the EMBL/GenBank/DDBJ databases.
RL   Louis H Nel, Dept. of Microbiology and Plantpathology, University of
RL   Pretoria, Pretoria, Transvaal, 0002, South Africa
XX
DR   SWISS-PROT; Q85967; VNS1_AHSV9.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1748
FT                   /db_xref="taxon:10896"
FT                   /organism="African horse sickness virus"
FT                   /strain="serotype 9"
FT   CDS             36. .1682
FT                   /codon_start=1
FT                   /db_xref="SWISS-PROT:Q85967"
FT                   /note="Author's comments: ds RNA virus; nonenveloped;
FT                   overlap of sequenced fragments; homology with related
FT                   sequence"
FT                   /gene="NS1"
FT                   /product="Nonstructural protein NS1"
FT                   /protein_id="AAA16200.1"
FT                   /translation="MDRLLTYFQVRGERANAVRLFGEISEQIDCSHLKRDCFVNGICAR
FT                   QHFKECCNIATDNGSRTNADKLVALAMRALLDRQTIWACVIKNADYVSQYADEQMEEEV
FT                   NKLYDVYLQSGTREEFEGFRQRSRPSRVVMDDSCSMLSYFYIPMNQGNPAPVAKLSRWG
FT                   QFGICYYDRTNVDGLIPYDEIGLAQAIDGLKDLIEGRLPVCPYTGVNSRINAVLHLPLE
FT                   MEVIMAVQENATQLMRRAAQDFKFITHAGWKLYPRLLRQRFAIGDACGGVIHHVMLGHL
FT                   RYYDGDTSIVKYCFLYDGSLDWRTWTVPLHLMRTARLGHLQPESILFFMHKSLRVRYVL
FT                   WLTSLCLTQSQWLIQKLPELTGGTDVFYTRAYVHAENHKVPNDRDLMMNEVFRKIDDHW
FT                   VIQKCHTTKEAITVTAIQIQRSIRGDGQWDTPMFHQSMALLTRLIVYWLTDVTERSAIF
FT                   RLTCYAIFGCKPTARGRYIDWDDLGTFMKNVLDGRDLTVLEDETCFISMMRMAMLHVRR
FT                   SKVVCATVLEAPLEIQQVGQIVEVPFDFMHN"
XX
SQ   Sequence 1748 BP; 520 A; 288 C; 443 G; 497 T; 0 other;

U01069  Length: 1748  December 21, 2001 15:57  Type: N  Check: 7934  ..

       1  gttaaagaac ctaggcggtt tggcaacaca caaacatgga taggctcttg
      51  acttatttcc aggtacgagg ggagagagca aacgctgttc ggctgtttgg
     101  agagatttcc gaacaaatag attgctcaca tctcaaacga gattgctttg
     151  taaatggaat atgtgcaaga caacacttta aagaatgctg taatattgct
     201  acagataatg gctcacgcac gaacgcagat aaattagtag ctttagctat
     251  gcgagcgctt ttagatagac aaactatttg ggcttgtgtc atcaagaatg
     301  cggattacgt tagtcaatat gctgatgagc agatggagga agaagttaat
     351  aaactgtatg atgtctatct ccagagcggg acgagagagg aatttgaagg
     401  atttagacag agaagtagac caagtagagt cgtgatggat gatagttgtt
     451  caatgctctc atatttttac attccaatga atcaaggaaa tccagctcca
     501  gttgcaaagc ttagccgatg gggtcaattt ggaatttgtt actatgatag
     551  gacaaatgtt gatggattga ttccatatga tgaaatcggt ttagctcaag
     601  ctatagatgg tctaaaagat ttgattgaag ggcgattgcc tgtttgccct
     651  tatactggag tgaatagcag gattaatgct gttttacatc taccgttaga
     701  aatggaagtg ataatggcag tgcaggaaaa tgctacacaa ttaatgcgca
     751  gagcagcaca ggatttcaaa ttcatcacac acgctggatg gaagctatac
     801  ccaagattgt tgcgacaacg ttttgcgatc ggagacgctt gcggaggggt
     851  gattcatcat gtgatgcttg gccatttaag atattatgat ggagatacga
     901  gtatcgtaaa gtattgcttc ctttacgatg gatctctaga ttggaggact
     951  tggacagttc ctttacacct gatgaggaca gcgaggttgg gacatctgca
    1001  accggaatca attttgttct ttatgcataa aagcttacgt gtcaggtatg
    1051  ttttatggtt gacctcgctc tgcttgacac aatcccagtg gttgattcaa
    1101  aaattgcctg aactaacagg gggcacagat gtgttctata cacgcgcgta
    1151  tgtacatgcg gagaatcaca aagtgccaaa tgacagagat ttgatgatga
    1201  atgaagtttt caggaagatc gatgatcatt gggtgatcca gaagtgtcat
    1251  acaacgaagg aagcgattac tgtaaccgca attcagatcc agaggtcaat
    1301  cagaggtgat gggcagtggg atactccgat gtttcaccaa tcaatggctc
    1351  tgttaacacg attgattgtt tattggttaa cagatgtgac tgagagaagc
    1401  gctatctttc ggctgacttg ttatgcaatc tttggatgta agccaacagc
    1451  tcgaggtaga tatattgatt gggacgatct tggaacgttc atgaaaaatg
    1501  tgttagatgg aagagacttg actgttttgg aagatgagac atgttttatt
    1551  tcgatgatga ggatggcgat gttgcatgtg cggagatcca aggtagtgtg
    1601  cgcaactgtg ttggaggcgc cattggaaat acaacaggtt ggtcagatcg
    1651  ttgaggtacc ctttgatttc atgcataatt agatcaaatt taaaagtttg
    1701  tacccgggaa gtaggttaaa atcatatccc cctggttcac aaacttac