Sequence of DPV Potato virus Y

Potato virus Y capsid protein mRNA, partial cds.

ACC No: U10378

Dated: 2000-03-04 | Length: 1231 | CRC: 1365266350

                !!NA_SEQUENCE 1.0
ID   PV10378    standard; RNA; VRL; 1231 BP.
XX
AC   U10378;
XX
SV   U10378.1
XX
DT   28-JUN-1995 (Rel. 44, Created)
DT   04-MAR-2000 (Rel. 63, Last updated, Version 2)
XX
DE   Potato virus Y capsid protein mRNA, partial cds.
XX
KW   .
XX
OS   Potato virus Y
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1231
RA   d'Aquino L., Dalmay T., Burgyan J., Ragozzino A., Scala F.;
RT   "Biological, serological and molecular characterization of an isolate of
RT   potato virus Y inducing veinal necrosis in pepper";
RL   Unpublished.
XX
RN   [2]
RP   1-1231
RA   d'Aquino L.;
RT   ;
RL   Submitted (06-JUN-1994) to the EMBL/GenBank/DDBJ databases.
RL   Luigi d'Aquino, Plant Science, Agricultural Biotechnology Center,
RL   Szent-Gyorgyi A. 4, Godollo, 2101, Hungary
XX
DR   SPTREMBL; Q85108; Q85108.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1231
FT                   /db_xref="taxon:12216"
FT                   /organism="Potato virus Y"
FT                   /lab_host="Nicotiana tabacum"
FT                   /specific_host="Capsicum annuum"
FT                   /isolate="nnp"
FT   CDS             <1. .>897
FT                   /codon_start=3
FT                   /db_xref="SPTREMBL:Q85108"
FT                   /product="capsid protein"
FT                   /protein_id="AAA19172.1"
FT                   /translation="RAVDEEELRIFTEMIVALDDEFECVPYEVHHQANDTIDAGGSSKK
FT                   DAKPEQDSIQPSSNKGKDKDVNAGTSGTHTVPRIKAITSKMRMPKSKGAAALNLEHLLE
FT                   YAPQQIDISNTRATQSQFDTWYEAVRMAYDIGETEMPTVMNGLMVWCIENGTSPNVNGV
FT                   WVMMDGSEQVEYPLKPIVENAKPTLRQIMAHFSDVAEAYIEMRNKKEPYMPRYGLVRNL
FT                   RDGSLARYAFDFYEVTSRTPVRAREAQIQMKAAELKSAKPRLFGLDGGISTQEENTERH
FT                   TTEDVSPSIHTLLGVKN"
XX
SQ   Sequence 1231 BP; 387 A; 218 C; 306 G; 320 T; 0 other;

U10378  Length: 1231  December 21, 2001 15:57  Type: N  Check: 4851  ..

       1  caagggcagt ggatgaggag gagctacgaa tcttcactga aatgattgtt
      51  gcactggatg atgaatttga gtgtgttcct tatgaagtac accaccaggc
     101  aaacgacaca attgatgctg gagggagcag taagaaagat gcgaagccag
     151  aacaggatag catccaacca agttctaaca agggaaagga taaggacgtg
     201  aatgctggta catctgggac acatactgta ccaagaataa aggctataac
     251  gtcaaaaatg agaatgccta aaagcaaagg agcagccgcg ctgaacttag
     301  aacacttact cgagtatgct ccacaacaga tagacatctc aaatactcgg
     351  gcaactcaat cacagtttga tacgtggtat gaagcagtgc ggatggcata
     401  cgacataggg gaaacagaaa tgccaactgt gatgaatggg cttatggttt
     451  ggtgcattga aaatggaacc tcgccaaatg tcaacggagt ttgggttatg
     501  atggatggaa gtgaacaagt tgaatatccg ttgaaaccaa tcgttgagaa
     551  tgcaaaaccg acccttaggc aaatcatggc acatttctca gatgttgcag
     601  aagcgtatat agaaatgcgc aacaaaaagg aaccatacat gccacgatat
     651  ggtttagttc gaaacttgcg ggatggaagt ttagcgcgct atgcctttga
     701  cttttatgaa gttacatcac gaacaccagt gagggccaga gaagcgcaaa
     751  tacagatgaa ggccgcagaa ttaaaatcag ctaaacctcg acttttcggg
     801  ttggatggtg gcatcagtac acaagaggag aacacagaga ggcacaccac
     851  cgaggatgta tctccaagta tccatactct acttggagtt aagaacatgt
     901  gattgtagtg tctctccgga cgatatataa gtatttacat atgcagtaag
     951  tattttggct tttcctgtac tacttttatc ataattaata atcagtttga
    1001  atattactaa tagatagagg tggcagggtg atttcgtcat tgtggtgact
    1051  ctatctgtta atttcgcatt attaagtctt agataaaagt gccgggttgt
    1101  cgttgttgtg gatgattcat cgattaggtg atgttgcgat tctgtcgtag
    1151  cagtgactat gtctggatct atctgcttgg gtggtgttgt gatttcgtca
    1201  taacagtgac tgtaaacttc aatcaggaga c