Sequence of DPV Banana bunchy top S1 alphasatellite

Banana bunchy top virus DNA III ORF V1 and ORF C1 genes, complete cds.

ACC No: U12586

Dated: 2000-03-04 | Length: 1111 | CRC: 737682662

                !!NA_SEQUENCE 1.0
ID   BB12586    standard; circular DNA; VRL; 1111 BP.
XX
AC   U12586;
XX
SV   U12586.1
XX
DT   18-FEB-1995 (Rel. 42, Created)
DT   04-MAR-2000 (Rel. 63, Last updated, Version 2)
XX
DE   Banana bunchy top virus DNA III ORF V1 and ORF C1 genes, complete cds.
XX
KW   .
XX
OS   Banana bunchy top virus
OC   Viruses; ssDNA viruses; Circoviridae.
XX
RN   [1]
RP   1-1111
RA   Wu R.-Y., You L.-R.;
RT   "Nucleotide sequences of DNA III and DNA IV associated with banana bunchy
RT   top virus and their relation to other closely related virus DNAs";
RL   Unpublished.
XX
RN   [2]
RP   1-1111
RA   Wu R.-Y.;
RT   ;
RL   Submitted (25-JUL-1994) to the EMBL/GenBank/DDBJ databases.
RL   Rey-Yuh Wu, Agricultural Biotechnology Division, Development Center for
RL   Biotechnology, 81 Chang Hsing Street, Taipei, 10671, Taiwan, ROC
XX
DR   SPTREMBL; Q89472; Q89472.
DR   SPTREMBL; Q89685; Q89685.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1111
FT                   /db_xref="taxon:12585"
FT                   /organism="Banana bunchy top virus"
FT                   /clone="H-4"
FT   TATA_signal     1. .8
FT   stem_loop       15. .49
FT   CDS             79. .933
FT                   /codon_start=1
FT                   /db_xref="SPTREMBL:Q89685"
FT                   /note="ORF V1"
FT                   /protein_id="AAA61875.1"
FT                   /translation="MSSFKWCFTLNYSSAAEREDFLALLKEEELNYAVVGDEVAPSSGQ
FT                   KHLQGYLSLKKSIKLGGLKKKYSSRAHWERARGSDEDNAKYCSKETLILELGFPASQGS
FT                   NRRKLSEMVSRSPERMRIEQPEIYHRYTSVKKLKKFKEEFVHPCLDRPWQIQLTEAIDE
FT                   EPDDRTIFWVYGPNGNEGKSTYAKSLMKKDWFYTRGGKKENILFSYVDEGSEKHIVFDI
FT                   PRCNQDYLNYDVIEALKDRVIESTKYKPIKLVELNNIHVIVMANFMPEFCKISEDRIKI
FT                   IYC"
FT   CDS             complement(497. .643)
FT                   /codon_start=1
FT                   /db_xref="SPTREMBL:Q89472"
FT                   /product="ORF C1"
FT                   /protein_id="AAA61876.1"
FT                   /translation="MTSHMLISPHYHSDHRPRRSFDHLVPRQLPPSIESAMVYRGKDER
FT                   IPP"
XX
SQ   Sequence 1111 BP; 344 A; 213 C; 260 G; 294 T; 0 other;

U12586  Length: 1111  December 21, 2001 15:57  Type: N  Check: 2156  ..

       1  tatatatagt tttgcccgag gaagtggcct agtattaccc acttcctcgc
      51  ccttcttcct cgcccctacg tcatcagtat gtcatctttt aaatggtgct
     101  tcactctgaa ctactcctcc gcagctgagc gagaagactt tctcgctctt
     151  ctgaaggagg aagagcttaa ctacgcagtt gtcggcgacg aagtcgctcc
     201  gagctccggc cagaagcacc tacagggata tctatccctg aagaaatcta
     251  taaaacttgg aggattgaag aagaagtatt cttcgagagc tcactgggag
     301  agggcgagag gatctgacga agataatgct aagtactgtt ctaaagaaac
     351  cctaattctt gaattggggt ttcccgcctc tcaaggctct aatagacgga
     401  aactatcgga gatggtttct agatctccag aacgcatgag aattgaacag
     451  cctgagatat atcacagata cacatctgtg aagaagttaa aaaaattcaa
     501  ggaggaattc gttcatcctt gcctcgatag accatggcag attcaattga
     551  cggaggcaat tgacgaggaa ccagatgatc gaacgatctt ctgggtctat
     601  ggtccgaatg gtaatgaggg gaaatcaaca tatgcgaagt cattaatgaa
     651  gaaggactgg ttctacacca gaggtgggaa gaaggagaac atactgttct
     701  cttacgtgga cgaaggatct gagaagcata ttgtatttga tattcctcgc
     751  tgtaatcagg attatttaaa ttatgatgtt atagaggcat taaaggatag
     801  ggtgatagag agtactaaat ataaacctat taagttagtt gaattgaata
     851  atatacatgt aattgtaatg gctaatttca tgccagaatt ctgtaaaatc
     901  tccgaagata gaataaagat tatttattgt taaataacac gctatgacaa
     951  aaggggaaaa atgaagaatc gggggttgat tgtgctatcc taacgattaa
    1001  gggccgcagc ccataatggg ccggaggccc atattaaatg tcgctggcgg
    1051  gtcattagac ccgtttagac gaagcttctt ctagaaggaa caactttaag
    1101  ttcctcgccc c