Sequence of DPV Papaya ringspot virus

Papaya ringspot virus isolate Vietnam coat protein mRNA, partial cds.

ACC No: U14742

Dated: 2000-03-04 | Length: 848 | CRC: 398226976

                
ID   PR14742    standard; mRNA; VRL; 848 BP.
XX
AC   U14742;
XX
SV   U14742.1
XX
DT   04-JAN-1995 (Rel. 42, Created)
DT   04-MAR-2000 (Rel. 63, Last updated, Version 4)
XX
DE   Papaya ringspot virus isolate Vietnam coat protein mRNA, partial cds.
XX
KW   .
XX
OS   Papaya ringspot virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-848
RX   PUBMED; 7996146.
RA   Bateson M.F., Henderson J., Chaleeprom W., Gibbs A.J., Dale J.L.;
RT   "Papaya ringspot potyvirus: isolate variability and the origin of PRSV-P
RT   (Australia)";
RL   J. Gen. Virol. 75:3547-3553(1994).
XX
RN   [2]
RP   1-848
RA   Bateson M.F.;
RT   ;
RL   Submitted (15-SEP-1994) to the EMBL/GenBank/DDBJ databases.
RL   Marion F. Bateson, Centre for Molecular Biotechnology, Queensland
RL   University of Technology, 2 George St., Brisbane, Queensland 4001,
RL   Australia
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .848
FT                   /db_xref="taxon:12205"
FT                   /mol_type="mRNA"
FT                   /organism="Papaya ringspot virus"
FT                   /strain="type W"
FT                   /specific_host="Carica papaya"
FT                   /isolate="Vietnam"
FT   CDS             <1. .848
FT                   /citation=[1]
FT                   /codon_start=3
FT                   /db_xref="GOA:Q84947"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:Q84947"
FT                   /product="coat protein"
FT                   /protein_id="AAA59076.1"
FT                   /translation="GLNEKLKEKEKQKEKEKEKDKQKDKDNDGASDENDVSTSTKTGER
FT                   DRDVNAGTSGTFTVPRIKSFTDKMILPRIKGKSVLNLNHLLQYNPQQIDISNTRATQSQ
FT                   FEKWYEGVRNDYGLNDNEMQVMLNGLMVWCIENGTSPDISGVWVMMDGEIQVDYPIKPL
FT                   IEHATPSFRQIMAHFSNAAEAYIAKRNATERYMPRYGIKRNLTDISLARYAFDFYEVNS
FT                   KTPDRAREAHMQMKAAALRNTSRRMFGMDGSVSNKEENTERHTVEDVNRDMHSLLGMRN
FT                   "
XX
SQ   Sequence 848 BP; 304 A; 143 C; 197 G; 204 T; 0 other;

u14742 Length: 848  04-MAR-2000  Type: N  Check: 7710  ..

       1  ctggtctaaa tgaaaagctc aaagaaaagg aaaaacagaa agaaaaagaa
      51  aaagaaaaag ataaacaaaa agataaagat aacgatggag ctagtgacga
     101  aaatgatgtg tcaactagca caaagactgg agagagagat agagatgtca
     151  acgccggaac tagcggaact ttcactgttc caaggataaa gtcttttact
     201  gataagatga ttttaccaag aattaaggga aagtctgtcc ttaatttgaa
     251  tcatcttctt cagtataatc cgcaacaaat tgacatctca aacactcgtg
     301  ccactcaatc ccaatttgaa aagtggtatg agggagtgag gaatgattat
     351  ggtcttaatg ataacgaaat gcaagtgatg ttaaatggtt taatggtttg
     401  gtgtatcgaa aatggtacat ctccagacat atctggtgtt tgggtaatga
     451  tggatgggga aatccaagtc gattatccca tcaaaccttt aattgaacat
     501  gcaactcctt cattcaggca aatcatggct cacttcagta acgcggcaga
     551  ggcatatatc gcaaagagaa atgcaactga gaggtacatg ccgcggtatg
     601  gaattaaaag aaatttgact gacattagtc tcgctcgata tgcttttgat
     651  ttctatgagg tgaattcgaa aacacctgat agggctcgtg aagctcatat
     701  gcagatgaag gctgcagcgt tgcgcaatac tagtcgcaga atgttcggaa
     751  tggacggcag cgtcagtaac aaggaagaaa atacggagag acacacagtg
     801  gaagatgtca acagagacat gcactctctc ctgggtatgc gcaattaa