Sequence of DPV Peanut stunt virus
Peanut stunt virus ER RNA 3, complete sequence.
ACC No: U15730
Dated: 2004-06-22 | Length: 2188 | CRC: 1251058452
!!NA_SEQUENCE 1.0
ID PS15730 standard; genomic RNA; VRL; 2188 BP.
XX
AC U15730;
XX
SV U15730.1
XX
DT 18-MAY-1995 (Rel. 43, Created)
DT 22-JUN-2004 (Rel. 80, Last updated, Version 4)
XX
DE Peanut stunt virus ER RNA 3, complete sequence.
XX
KW .
XX
OS Peanut stunt virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Bromoviridae;
OC Cucumovirus.
XX
RN [1]
RP 1-2188
RA Naidu R.A., Hu C.-C., Pennington R.E., Ghabrial S.A.;
RT "Differentitation of eastern and western strains of peanut stunt
RT cucumovirus based on satellite RNA support and nucleotide sequence
RT homology";
RL Phytopathology 85:502-507(1995).
XX
RN [2]
RP 1203-2188
RX MEDLINE; 91329730.
RX PUBMED; 1868220.
RA Naidu R.A., Collins G.B., Ghabrial S.A.;
RT "Nucleotide sequence analysis of a cDNA clone encoding the coat protein
RT gene of peanut stunt virus";
RL Plant Mol. Biol. 17(1):175-177(1991).
XX
RN [3]
RP 1-2188
RA Ghabrial S.A.;
RT ;
RL Submitted (11-OCT-1994) to the EMBL/GenBank/DDBJ databases.
RL Said A. Ghabrial, Plant Pathology, University of Kentucky, S-305
RL Agricultural Sciences Center N., Lexington, KY 40546-0091, USA
XX
FH Key Location/Qualifiers
FH
FT source 1. .2188
FT /db_xref="taxon:12313"
FT /mol_type="genomic RNA"
FT /organism="Peanut stunt virus"
FT /strain="ER"
FT /specific_host="Vigna unguiculata"
FT /segment="RNA 3"
FT /clone="PSV-3-19; PSV-105"
FT CDS 120. .989
FT /codon_start=1
FT /db_xref="GOA:Q85066"
FT /db_xref="UniProt/TrEMBL:Q85066"
FT /function="putative 30 kDa movement protein"
FT /product="3a protein"
FT /protein_id="AAA70086.1"
FT /translation="MAFSGSSRTLTQQSSAASSDDLHKILFSPDAIKEMATKSDLGRHH
FT CVRADDAVCVRPLVPESTSNKVAQWFKTGYEAGKLPSKGYMIIPQVLCAVTRTVTSSAE
FT GSLEIYLADTGDVELAPIDDQVVTLHNRDLPALISFQPTYDCPMEKVGDRSRCFAVVIK
FT RHGYLGHPGSTASVCSNWQPKFSSKNNNYKSAAAGKTLVLPYNRLSELSGPSAVARLLK
FT SQLNVQRLPLFQLPGSPIMQKAIGSEHEEGLNCKRKPPLEEDRTTPQDSVGSRPSVVNG
FT IERPGTLL"
FT misc_feature 1120. .1132
FT /note="intercistronic domain conserved among viruses in the
FT family Bromoviridae"
FT /function="putative promoter"
FT CDS 1249. .1926
FT /citation=[2]
FT /codon_start=1
FT /db_xref="GOA:Q89526"
FT /db_xref="UniProt/TrEMBL:Q89526"
FT /evidence=EXPERIMENTAL
FT /function="encapsidation of viral RNAs"
FT /product="coat protein"
FT /protein_id="AAA70087.1"
FT /translation="MAPKGTGNGSRRPRRGRRSSPAEDAHARELRAVTAQLNRLVTLTA
FT ARVPTLDHPTFVSSKQCMKGYTYTTLDIRPTQTQKGHSFGQRLNLPVPVSEFPKKKVSR
FT VQLRLNPSPAFDSTVWVTLRKLPPGYSLASENVYKLFTDGGAAVLTYQHIPTGIQRDNK
FT ILYNLSSVGTEIGDIGDYAIIVHSKDDTLEADEMVIHVDVEHQRIPSLPLSRSRVQVLV
FT RRL"
XX
SQ Sequence 2188 BP; 541 A; 526 C; 511 G; 610 T; 0 other;
U15730 Length: 2188 June 29, 2004 08:33 Type: N Check: 2389 ..
1 gttttaccaa ccaggaatct gaccgcgtgc cagtaggatt ccactctctt
51 gttagtagat agtagtaccc acgttttgta aatatacgtg ttgttgtgtt
101 ggtataccct catttgagta tggctttctc tgggtctagt cggactttaa
151 cacaacagtc ctcggcggcg tcttctgatg atctacacaa gattttattt
201 agccccgatg ccataaaaga gatggcgact aagtcggacc taggtcgaca
251 ccactgcgtg cgcgcagatg atgccgtgtg tgtcagaccc ctcgttcccg
301 aatctacgtc caataaagtg gcccaatggt ttaaaaccgg ttatgaagcc
351 ggaaaattac catctaaagg gtatatgatc atcccacaag ttctatgcgc
401 cgtcacccgt actgtaacgt ccagcgctga aggttctctc gagatctatt
451 tggctgacac aggtgatgtt gaacttgctc caatcgatga tcaggtggtc
501 acattgcata accgagacct ccctgctcta atatcattcc aacctacata
551 tgattgcccg atggaaaagg ttggtgacag aagcaggtgt tttgccgttg
601 tcatcaagag gcatggttat cttggacatc cagggagtac cgcaagtgta
651 tgcagcaact ggcaaccgaa gttctcatcg aagaataaca actataagtc
701 agcagctgcc ggtaagactc tagttctacc ttacaacaga ttatctgagc
751 tctcaggccc atcagctgta gctcgtctgt tgaaatcgca acttaacgtg
801 caaaggcttc ctctctttca gttacctggg agtcctatta tgcagaaggc
851 gattggtagt gagcacgagg aaggtttaaa ttgcaaaaga aagccacctt
901 tggaggagga ccgtaccacg ccccaggata gtgttggttc aaggccgtct
951 gtggttaacg gaattgaacg tcctgggact ttgttgtaaa tatacgctat
1001 tatggtagct atgtatatat ttactagtcg tattatcgtg ttgtgtgtta
1051 cggtaatgct ggcgtgatgg aaggatacag acccacattc agttgctaaa
1101 gccgtcgata taccttttgg gttcaattcc ttcggtcaat ttcgcgttcc
1151 tttagtttct aggatgctta tcctgaactc ccgtagtatt atggtattcg
1201 tctgtattgt gtttacttta gtacgcgtca accactttgt ttacttagat
1251 ggcacctaaa ggtactggta acggttctcg ccgacctcgt cgagggaggc
1301 gctcttctcc agcggaggat gctcatgcta gagagctccg cgctgtgact
1351 gctcaactga accgtttggt gaccctcacg gccgcccggg tgccaaccct
1401 cgatcatcca acctttgtct ctagcaagca gtgtatgaaa gggtacacat
1451 acactacgtt ggatatcaga ccgacacaaa ctcagaaggg ccatagtttc
1501 ggtcagaggt taaatttacc agttcccgta tctgaatttc cgaagaagaa
1551 ggtctctcgc gttcaactcc gattgaaccc gtcacccgcg ttcgactcca
1601 ctgtttgggt gacgctcaga aaattgcctc ctggctactc cctggcttcg
1651 gaaaatgtgt ataagctttt cacagacggc ggtgctgccg tgcttacgta
1701 tcaacacatc cctaccggta ttcaacgcga taacaagatt ctatataacc
1751 tctcttccgt cggcactgag atcggtgata taggcgatta cgccattatc
1801 gttcactcta aagatgatac attagaagcc gatgagatgg tgattcatgt
1851 agatgtagag catcagcgaa tcccttcgct accgctctcc cggtctaggg
1901 ttcaggtact agtccgaaga ctttaaacta ctcccctgta ttggggcgct
1951 aagttggtag ttatattact ctaaactatc tgaagtcgct aaacagttaa
2001 cactggtgaa cgggttgtcc atccagctta cggctaaaat ggtcagtcct
2051 accctaaagg taggccgagt ttcttacaag gactcgaggt actttatatc
2101 atctactcct ggtgattgtg aagagctgtg tacaacgtac acatcaagct
2151 cgggtacccc ctcttcggag ggtttccata ggagacca