Sequence of DPV Barley yellow dwarf virus-PAS

Barley yellow dwarf virus - PAV PAV-129 coat protein and ORF4 mRNAs, complete cds.

ACC No: U29604

Dated: 2006-02-27 | Length: 603 | CRC: 1096085087

                
ID   U29604     standard; mRNA; VRL; 603 BP.
XX
AC   U29604;
XX
SV   U29604.1
XX
DT   26-JUL-1995 (Rel. 44, Created)
DT   27-FEB-2006 (Rel. 86, Last updated, Version 3)
XX
DE   Barley yellow dwarf virus - PAV PAV-129 coat protein and ORF4 mRNAs,
DE   complete cds.
XX
KW   .
XX
OS   Barley yellow dwarf virus - PAV
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Luteoviridae;
OC   Luteovirus.
XX
RN   [1]
RP   1-603
RA   Chay C.A., Gray S.M.;
RT   "Diversity among isolates within the PAV serotype of barley yellow dwarf
RT   virus";
RL   Unpublished.
XX
RN   [2]
RP   1-603
RA   Chay C.A.;
RT   ;
RL   Submitted (20-JUN-1995) to the EMBL/GenBank/DDBJ databases.
RL   Catherine A. Chay, USDA/ARS, Tower Road, Ithaca, NY 14853, USA
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .603
FT                   /db_xref="taxon:12040"
FT                   /mol_type="mRNA"
FT                   /organism="Barley yellow dwarf virus - PAV"
FT                   /serotype="PAV"
FT                   /isolate="PAV-129"
FT   CDS             1. .603
FT                   /codon_start=1
FT                   /db_xref="GOA:Q65850"
FT                   /db_xref="InterPro:IPR001517"
FT                   /db_xref="UniProtKB/TrEMBL:Q65850"
FT                   /product="coat protein"
FT                   /protein_id="AAA70340.1"
FT                   /translation="MNSVGRRGPRRANQNGPRRRSRRTIRPVVVVQPNRAGPRRRNGRR
FT                   SGRRGPNSIPGSTGRTEVFIFSVDNLKANSSGAIKFGPSLSQCPALSDGILKSYHRYKI
FT                   TSIRVKFQSHASAATSGAIFVELDTACKQSALGSYINSFTISKTASKSFRAEAINGKEF
FT                   QESTIDQFWLLYKANGTTTDTAGQFIITINVSMLTPK"
FT   CDS             44. .505
FT                   /codon_start=1
FT                   /db_xref="GOA:Q65851"
FT                   /db_xref="InterPro:IPR001964"
FT                   /db_xref="UniProtKB/TrEMBL:Q65851"
FT                   /note="ORF4"
FT                   /product="unknown"
FT                   /protein_id="AAA70341.1"
FT                   /translation="MAQEGGAVEQFGQWLWSNPIEQDPDDEMVDAQEEEGQILYLDQQA
FT                   GLRYSYSQSTTLKPTLPGQSNSAPVYRNAQRFQTEYLSPTTVTRSQVSVLSFSHTRPPL
FT                   RQALSLLNSTPRASNQPWVATLIPSPSAKLPPSPSEPRRLMGRNSKNQR"
XX
SQ   Sequence 603 BP; 182 A; 159 C; 135 G; 127 T; 0 other;

u29604 Length: 603  27-FEB-2006  Type: N  Check: 8816  ..

       1  atgaattcag taggccgtag aggacctaga cgagcaaatc aaaatggccc
      51  aagaaggcgg agccgtagaa caattcggcc agtggttgtg gtccaaccca
     101  atcgagcagg acccagacga cgaaatggtc gacgctcagg aagaagaggg
     151  ccaaattcta tacctggatc aacaggcagg actgaggtat tcatattctc
     201  agtcgacaac cttaaagcca actcttccgg ggcaatcaaa ttcggcccca
     251  gtttatcgca atgcccagcg ctttcagacg gaatacttaa gtcctaccac
     301  cgttacaaga tcacaagtat ccgtgttaag tttcagtcac acgcgtccgc
     351  cgctacgtca ggcgctatct ttgttgaact cgacaccgcg tgcaagcaat
     401  cagccttggg tagctacatt aattccttca ccatcagcaa aactgcctcc
     451  aagtccttca gagccgaggc gattaatggg aaggaattcc aagaatcaac
     501  gatagaccaa ttctggctac tctacaaggc aaatgggacc actactgaca
     551  ccgctggaca gttcattata acgataaacg tcagtatgtt aactcccaaa
     601  tag