Sequence of DPV Watermelon silver mottle virus
Watermelon spotted wilt virus nonstructural protein (NSm) and glycoprotein precursor genes, complete cds.
ACC No: U75379
Dated: 2000-03-04 | Length: 4880 | CRC: -2110777222
!!NA_SEQUENCE 1.0
ID WSU75379 standard; RNA; VRL; 4880 BP.
XX
AC U75379;
XX
SV U75379.1
XX
DT 04-FEB-1997 (Rel. 50, Created)
DT 04-MAR-2000 (Rel. 63, Last updated, Version 2)
XX
DE Watermelon spotted wilt virus nonstructural protein (NSm) and glycoprotein
DE precursor genes, complete cds.
XX
KW .
XX
OS watermelon spotted wilt virus
OC Viruses; ssRNA negative-strand viruses; Bunyaviridae; Tospovirus.
XX
RN [1]
RP 1-4880
RA Chu F.-H., Yeh S.-D.;
RT "Comparison of replication forms and ambisense M RNA of watermelon silver
RT mottle virus with other tospoviruses";
RL Unpublished.
XX
RN [2]
RP 1-4880
RA Chu F.-H., Yeh S.-D.;
RT ;
RL Submitted (18-OCT-1996) to the EMBL/GenBank/DDBJ databases.
RL Department of Plant Pathology, National Chung Hsing University, 250
RL Kuo-Kuang Road, Taichung City, Taiwan, ROC
XX
DR SPTREMBL; P89251; P89251.
DR SPTREMBL; P89252; P89252.
XX
FH Key Location/Qualifiers
FH
FT source 1. .4880
FT /chromosome="M RNA"
FT /db_xref="taxon:43141"
FT /organism="watermelon spotted wilt virus"
FT /isolate="Taiwan"
FT 5'UTR 1. .55
FT CDS 56. .994
FT /codon_start=1
FT /db_xref="SPTREMBL:P89251"
FT /gene="NSm"
FT /product="nonstructural protein"
FT /protein_id="AAB41722.1"
FT /translation="MYRLSNVLKPFRLSNNTNKEMVPAVKTENNKSIIVRNVSKKDIDE
FT AIMNKVKTANGKQYVSGIDSSILGTYSSELDTGESDVGDSSDDILSRLVVEQSTHLSNW
FT KNDSLVGNGNDKVSFTISIMPTWNSGRRFMHISRLILWVVPTIPDSKNSIKVTLLDQNK
FT MTREEKIILSRQTSLKDPLCFIFHLNWSFPKERNTPKQCMQLNLTSDEKYAKGVSFASV
FT MYSWVKNFCDTPIASESNTCDVIPINRAKVIKSAALIEACKLMIPKGIGGKQLSNQIRA
FT LQKAAEKYAMEAENDADVIDVDIEMDNLLEI"
FT misc_feature 995. .1467
FT /note="intergenic region"
FT CDS complement(1468. .4833)
FT /codon_start=1
FT /db_xref="SPTREMBL:P89252"
FT /product="glycoprotein precursor"
FT /protein_id="AAB41723.1"
FT /translation="MKKYYLLVYCLGLASLLFVPDVYLLNQVDDSVQLKRIQDRYRVDD
FT PEDLIEKEEPTTIRVTRLKEEKLSRILRNDGSTTQSPVLELSCDNFEKRHCVIKGVSEF
FT NAHYQIDTGDKIISCINNSANIFDICQYEKEFKKIKFKNFPVVPVLKLENKRVLEVGTK
FT FFFVDKSNNPINIDPKVDLKSPTVARLSVRLSGDCKINQVSMSSPYQIKLRSEENIGLL
FT IKDVKNSKPANIKSITGDSTINFKPEELDGNHFLLCGDKSSLIAKVDIPVRNCVSKYSE
FT EPKKIFFCTNFSYFKWIFVFLMITFPVSWLIWKTKDALSIWYDVMGIVTYPILWVINWS
FT WPYFPLKCGICGCFSFLTHSCSEKCVCNQSKASRGHSEECYLSTRDKFEWRKLTLIQQF
FT QFIINTKLSSNFLVFVTKMILASILISYIPSSIALKQNNLCVEKCYYNLNLDSLTTDKF
FT GTMGNGYETCECSIGNVITETVYRSGVPMSRATSLNDCVLGSDLCMVSNNQAQNLFACR
FT NGCNSLESIKNIPNIKFNKFYKGHSFKGNLTSLKIANRLREGYMDSFTESKILEEESAK
FT EYKFYKSLKADDVPPRNLMPRQSLVFSTEVDGKYRYLLEMDIKSNTGSIYLLNDDAMHS
FT PMEFIIYVKSVGVEYDVRYKYSTAKIDTTVADYLVTCTGNCADCRKQNPKVGSLDFCVT
FT PTSWWGCEELGCLAINEGSICGHCTSIYDLSSLVNIYQVVESHVTAEICIKSLDGYSCK
FT RHSDRSPIQTDYYQLDMSVDLHNDYMSTDKLFAVTKQQKILTGNIADLGDFSGSSFGHP
FT QITIDGIPLSVPSTLSQNEFTWSCSAVGDKKVNIRQCGLYTYSAIYVLSPSKDISHLDE
FT SKNKLYMEKDFLVGKLKMVIDMPKEMFKKIPTKPVLSEAKMVCSGCSKCAIGIDCNITY
FT TSDTTFSARLMMDTCSFKSDQIGTFLGPNEKSIKAYCYEEITDKSLKLIPEDQQELTVD
FT IQVDEFIQVDRDTIIHFDDKSAHDENKHHSDTSISSLWDWIKAPFNWVASFFGSFFDLV
FT RVILVIMAVCVGVYIVSSIFKLSRTYYVDKRRQKLEDAMESVESSILLTNFTRTDQTRK
FT RKSPPKGYDLCLDI"
FT 3'UTR 4834. .4880
XX
SQ Sequence 4880 BP; 1541 A; 866 C; 839 G; 1634 T; 0 other;
U75379 Length: 4880 December 21, 2001 15:59 Type: N Check: 4653 ..
1 agagcaatcg gtgcgccaat tactagttaa atcatcaaat aattaacaag
51 aaataatgta tcgcttgtct aatgtcttaa aacctttccg tctttcgaat
101 aacacaaata aagagatggt ccctgctgtg aaaacggaaa acaacaagag
151 cattatagtt agaaatgtct ctaaaaagga catagatgag gctataatga
201 acaaagttaa gacagcaaat gggaaacaat atgtttctgg catagattct
251 agtatcttgg gaacctactc cagtgaatta gatacaggtg agtcagatgt
301 aggagacagt tcagatgata ttttatccag acttgtagtt gaacaaagca
351 cccacttgag caattggaaa aatgactctc ttgttggtaa tggaaatgac
401 aaagtcagtt tcactataag cataatgcct acatggaata gtgggaggag
451 attcatgcat atatctagac tcatattgtg ggttgtccca actattcccg
501 attcaaagaa cagcatcaag gtcactctac tcgatcaaaa caaaatgact
551 cgtgaagaga agataatttt gagcaggcaa acatctttaa aagatccttt
601 gtgcttcatt ttccacttga attggtcttt ccctaaagaa aggaatacac
651 ctaagcagtg catgcaactt aacctgacaa gtgatgaaaa gtatgctaaa
701 ggggtaagct ttgcatcagt tatgtattcc tgggtaaaaa acttctgtga
751 tactcctatt gcatcagaaa gtaatacttg tgatgtgata ccaataaata
801 gagctaaggt aattaaatct gctgctttga ttgaagcatg taagctaatg
851 ataccaaagg gaattggagg gaagcaacta tcgaaccaaa ttagagctct
901 acaaaaggct gcagaaaaat atgcaatgga agcagagaat gatgcagatg
951 tcattgatgt ggatatagaa atggataacc ttcttgaaat ttaaatcgta
1001 agcaaatgat ttaggctatt taaatattaa tttgtgtttg aatttagatt
1051 taaacataat taaatctatt ttcttgtgtg cttatgagtc agtattttat
1101 attttgtcat ttgtctctat gtatgtctag aatatgtata gttgtatgca
1151 attttaataa taataaataa atacataaaa acaacaaaaa atatgcaaaa
1201 atcaaaaaca aaaaatatat atatatataa aataaaaata aaataataac
1251 taactattat ataattaaat aaggctacgg ccaagtgttg gcttttcagc
1301 ctttttttgc tattttttaa ttttctagtt tttttgttta tttgttttta
1351 tcatagtttt atttgtttca tttattattt tactcatcta cttacttatc
1401 tgactttttc atgctgtgta gctgagcgca atttattttc gaaatttgag
1451 ttacagataa gacacgttta tatatctaaa cacaaatcat agcctttcgg
1501 aggagatttc ctcttcctgg tctgatcagt tcttgtaaag ttagtcaata
1551 aaatgcttga ttcaacagac tccatagcat cttctaattt ctgccttctt
1601 ttatctacgt agtatgttct agataatttg aatatgctgc tcacaatata
1651 tacacccaca cacacagcca tgatcactaa aattactcta actaaatcaa
1701 agaaactacc gaagaaagaa gctacccaat taaaaggtgc tttgatccag
1751 tcccacaagc tagaaatgga agtgtcagaa tggtgcttgt tttcatcatg
1801 tgcacttttg tcatcaaagt gaattattgt gtctcgatca acctgaatga
1851 actcatctac ttgtatgtct actgtaagtt cttgttgatc ttcagggatg
1901 agtttaagag atttgtctgt aatctcttca tagcaataag ctttgatgct
1951 tttctcattt ggacccaaga atgttcctat ttgatcagat ttaaaagagc
2001 aggtgtccat catcagcctt gcagagaatg ttgtgtctga cgtataagtt
2051 atattgcaat caatccctat agcacatttt gagcatccag agcacaccat
2101 tttagcctct gaaaggacag gtttggttgg tatttttttg aacatttctt
2151 tgggcatatc tataaccatt ttaagcttac cgactaaaaa atccttctcc
2201 atatacagct tatttttgga ttcatctaga tgtgatatgt cttttgatgg
2251 agataaaaca taaatagcac tgtatgtgta cagtccgcat tgccttatgt
2301 taactttttt gtctcctaca gcactgcaac tccatgtaaa ctcattttga
2351 gataaagtgg atggaactga taacgggatg ccatctatag ttatctgcgg
2401 atgaccaaat gatgatcctg aaaaatcacc caaatcagca atattccctg
2451 tgagaatttt ctgctgtttc gtgacagcaa ataacttatc agtactcata
2501 taatcattgt gtagatccac tgacatgtca agttgataat aatctgtttg
2551 aataggtgac ctatcagaat gtctcttgca agaataacca tctaatgatt
2601 ttatacaaat ttccgcagta acatgacttt ccacaacctg gtaaatgttg
2651 actagacttg ataaatcata aatgcttgtg caatggccac agatggatcc
2701 ttcattgatt gctaaacagc caagctcttc acatccccac caagaagttg
2751 gggtaacgca aaaatctaac gatcctactt tagggttttg ctttctacag
2801 tctgcacaat tgcctgtgca tgtgaccaaa taatctgcta ctgttgtatc
2851 aatttttgcc gttgagtact tgtatcttac atcatattca acaccaacac
2901 tttttacata aattatgaat tccattgggg agtgcatagc atcatcgtta
2951 agcaaatata tcgatcctgt gttagattta atgtccattt ctaaaagata
3001 tctatatttc ccatcaacct ctgttgaaaa tactaaagat tgcctaggca
3051 tcaaatttct aggtggaaca tcatctgctt ttaaactctt ataaaatttg
3101 tattccttgg cagattcttc ttctaggatc tttgattcag taaagctgtc
3151 catatatcct tctctcaatc tgttggctat ctttaaactg gttaagttgc
3201 ctttaaaaga atgacctttg taaaacttgt tgaatttaat atttggtatg
3251 ttttttatgg actcaaggga gttacagcca tttctgcatg caaacaagtt
3301 ttgagcttga ttgttgctca ccatacacag atctgagcct aaaacacaat
3351 cgtttagcga tgttgctctg gacatgggta caccagatct gtacaccgtt
3401 tcagtaataa cattccctat tgaacactcg catgtttcat acccattacc
3451 cattgttcca aacttgtctg ttgtcaaaga atctaaattc aaattgtaat
3501 aacatttttc cacgcacaag ttgttctgtt tgagtgcaat acttgacggt
3551 atgtaagaga taagaattga tgccagaatc atttttgtta caaaaaccag
3601 aaaattgcta cttaacttgg tgtttattat aaactgaaat tgctggatca
3651 aagtcaattt gcgccattca aatttatctc tggtggatag atagcattct
3701 tcagaatgac ctctagatgc tttgctttga ttacaaacac acttttcaga
3751 gcaagaatga gttaagaagg agaagcatcc acagatccca cattttagag
3801 ggaaatatgg ccatgaccaa ttaatgaccc aaaggatagg gtatgtcaca
3851 atgcccatta catcgtacca gatacttaat gcatctttag tcttccagat
3901 cagccatgac acaggaaaag tgatcattaa gaatacaaag atccatttaa
3951 aataagagaa gtttgtgcag aagaaaatct ttttgggctc ttctgaatat
4001 ttagatacac agtttctaac tgggatgtct acttttgcaa ttaaactgga
4051 cttatctcca caaagtaaaa agtggttacc atctagttct tcaggtttaa
4101 agtttattgt tgagtcacca gtaattgatt ttatgtttgc aggtttagag
4151 ttctttacat cctttatcag caaccctatg ttctcttctg atctcaattt
4201 aatttggtaa ggagatgaca tagatacttg atttatcttg caatcaccag
4251 acaaccttac agaaagtctt gctacagttg gggacttcag atccaccttc
4301 gggtcaatgt tgatcgggtt gtttgattta tcaacgaaga aaaattttgt
4351 tcccacttca agaactcttt tgttttccag tttcagaaca gggaccactg
4401 ggaaattttt gaacttgatt ttcttgaatt ctttttcata ctggcaaata
4451 tcaaatatat tagcagaatt gttaatgcat gagataattt tatcaccggt
4501 atctatttgg taatgggcat tgaactcgct cacacctttg atgacacagt
4551 gtcttttttc aaaattgtca caacttaatt ctaggacagg agactgtgtt
4601 gtgctcccat cgtttcttaa gatccgtgac aatttctctt ccttgagtct
4651 agttactctg attgttgtgg gttcctcttt ctcaatgagg tcttcagggt
4701 cgtctactct gtatctatct tggattcttt ttaactggac actgtcatcc
4751 acctggttca aaaggtagac atcagggacg aacaaaagcg aagccagacc
4801 tagacagtag acaagtagat agtatttctt cattcttaaa aggttctttg
4851 agagtattta attgttgcac tgattgctct