Sequence of DPV Rotavirus A
Simian rotavirus SA11 gene for inner core protein VP3, genomic RNA
ACC No: X16062
Dated: 2003-03-27 | Length: 2591 | CRC: -2100745554
!!NA_SEQUENCE 1.0
ID RSVS3 standard; genomic RNA; VRL; 2591 BP.
XX
AC X16062;
XX
SV X16062.1
XX
DT 23-NOV-1989 (Rel. 21, Created)
DT 27-MAR-2003 (Rel. 75, Last updated, Version 3)
XX
DE Simian rotavirus SA11 gene for inner core protein VP3, genomic RNA
XX
KW inner core protein VP3.
XX
OS Simian rotavirus A/SA11
OC Viruses; dsRNA viruses; Reoviridae; Rotavirus; Rotavirus A.
XX
RN [1]
RP 1-2591
RA Liu M.;
RT ;
RL Submitted (09-AUG-1989) to the EMBL/GenBank/DDBJ databases.
RL Liu M., Division of Molecular Virology , Baylor College of Medicine, One
RL Baylor Plaza, Houston Texas 77030\, U S A.
XX
RN [2]
RP 1-2591
RX MEDLINE; 90016887.
RX PUBMED; 2552420.
RA Liu M., Estes M.K.;
RT "Nucleotide sequence of the simian rotavirus SA11 genome segment 3";
RL Nucleic Acids Res. 17(19):7991-7991(1989).
XX
FH Key Location/Qualifiers
FH
FT source 1. .2591
FT /db_xref="taxon:10923"
FT /mol_type="genomic RNA"
FT /organism="Simian rotavirus A/SA11"
FT /strain="simian"
FT /segment="3"
FT CDS 50. .2557
FT /db_xref="GOA:P15736"
FT /db_xref="UniProt/Swiss-Prot:P15736"
FT /product="inner core protein VP3"
FT /protein_id="CAA34198.1"
FT /translation="MKVLALRHSVAQVYADTQVYVHDDTKDSYENAFLISNLTTHNILY
FT LNYSIKTLEILNKSGIAAIALQSLEELFTLIRCNFTYDYELDIIYLHDYSYYTNNEIRT
FT DQHWITKTNIEEYLLPGWKLTYVGYNGSETRAHYNFSFKCQNAATDDDLIIEYIYSEAL
FT DFQNFMLKKIKERMTTSLPIARLSNRVFRDKLFPSLLKEHKNVVNVGPRNESMFTFLNY
FT PTIKQFSNGAYLVKDTIKLKQERWLGKRISQFDIGQYKNMLNVLTAIYYYYNLYKSKPI
FT IYMIGSAPSYWIYDVRHYSDFFFETWDPLDTPYSSIHHKELFFINDVKKLKDNSILYID
FT IRTDRGNADWKKWRKTVEEQTINNLDIAYEYLRTGKAKVCCVKMTAMDLELPISAKLLH
FT HPTTEIRSEFYLLLDTWDLTNIRRFIPKGVLYSFINNIITENVFIQQPFKVKVLNDSYI
FT VALYALSNDFNNRSEVIKLINNQKQSLITVRINNTFKDEPKVGFKNIYDWTFLPTDFDT
FT KEAIITSYDGCLGLFGLSISLASKPTGNNHLFILSGTDKYYKLDQFANHTSISRRSHQI
FT RFSESATSYSGYIFRDLSNNNFNLIGTNIENSVSGHVYNALIYYRYNYSFDLKRWIYLH
FT SIDKVDIEGGKYYEHAPIELIYACRSAKEFATLQDDLTVLRYSNEIENYINTVYSITYA
FT DDPNYFIGIQFRNIPYKYDVKIPHLTFGVLHISDNMVPDVIDILKIMKNELFKMDITTS
FT YTYMLSDGIYVANVSGVLSTYFKIYNVFYKNQITFGQSRMFIPHITLSFNNMRTVRIET
FT TKLQIKSIYLRKIKGDTVFDMVE"
XX
SQ Sequence 2591 BP; 987 A; 342 C; 408 G; 854 T; 0 other;
X16062 Length: 2591 June 22, 2004 14:38 Type: N Check: 9974 ..
1 ggctattaaa gcagtaccag tagtgtgttt tacctctgat ggtgtaaaca
51 tgaaagtact agctttaaga cacagtgtgg ctcaagtgta tgcagacact
101 caagtctacg ttcatgatga tacaaaagat agttatgaaa acgctttttt
151 aatctctaat cttacgaccc ataatatttt atacttaaat tatagcatta
201 aaacattaga aatattaaat aagtcaggaa tagctgcaat tgctttacaa
251 tcacttgaag aattattcac attaataagg tgtaatttca cttatgatta
301 tgaacttgat ataatatatt tacatgacta ttcatattat accaataatg
351 aaattagaac agaccaacat tggataacaa aaacaaatat tgaagaatat
401 ttactacctg gatggaaatt aacatatgtt ggttataatg gaagtgaaac
451 tagagcacat tataactttt catttaaatg tcaaaacgct gcaacagatg
501 atgatctaat aattgaatac atttattcag aagcgttgga cttccaaaat
551 tttatgttaa aaaagataaa ggaaagaatg actacatcgt tgcctatagc
601 tagattatct aacagagtat ttagggataa gttattccca tcattattga
651 aagaacataa gaatgtagtg aacgttggtc cgcgtaatga atctatgttt
701 acatttttaa attatccaac tataaaacaa ttttcaaatg gtgcgtattt
751 agtaaaagat actataaaat taaaacaaga acgatggtta ggtaaaagga
801 tatctcagtt tgatattggt cagtataaaa atatgctgaa tgttcttaca
851 gcaatttatt attactataa tttatataaa agtaaaccaa ttatatatat
901 gatcggatct gctccatctt attggatata tgacgttagg cattattccg
951 attttttctt tgaaacttgg gatccattgg acacaccata ttcatcaatc
1001 catcacaaag aattattttt tataaatgat gtgaagaaac tgaaggataa
1051 ctcaatattg tatattgata taagaaccga taggggcaat gctgattgga
1101 aaaaatggag aaagacagta gaagaacaaa ctattaataa tttggacata
1151 gcttatgaat atttacgaac gggtaaagcg aaggtgtgtt gtgttaagat
1201 gacagctatg gatttggaac tgccaatttc agctaaatta ctgcaccacc
1251 caactacgga aataagatca gaattttatt tattactaga tacttgggat
1301 ttaactaaca ttaggaggtt cattcctaaa ggcgtgttat attcatttat
1351 aaacaatata ataactgaaa atgtgtttat tcaacaacca tttaaagtaa
1401 aagtactgaa tgatagttat attgtagcgt tatatgcatt atcaaatgat
1451 tttaataata gatcagaagt aattaaatta attaataatc agaaacaatc
1501 tctaataact gttagaataa ataatacgtt taaggatgaa ccaaaagttg
1551 ggttcaaaaa tatctatgat tggacctttc ttccaaccga ctttgatacc
1601 aaagaagcta taattacttc atacgacggt tgtttaggac tctttggttt
1651 gtctatatcg ttagcatcaa aaccaacagg gaataatcat ttattcattt
1701 taagtggtac agataagtat tataaattgg atcaatttgc taatcacacc
1751 agtatatcga gaagatcaca ccaaattagg ttttcggaat ctgctacttc
1801 atattcaggt tatatattta gagatttgtc caataataat tttaatctaa
1851 ttggtactaa tatagagaat tcagtatcag gtcatgtata taatgcttta
1901 atttattata gatataatta ttcatttgat cttaaacgct ggatttattt
1951 acattctata gataaagttg atatagaagg aggaaagtat tatgaacacg
2001 caccaataga attaatttat gcatgtagat cagcaaaaga atttgctaca
2051 ttgcaggatg acttaactgt attgagatat tcaaacgaaa tagagaatta
2101 tattaataca gtatatagta taacatacgc tgatgatccg aattacttta
2151 tcggaataca atttagaaat ataccatata aatatgatgt taaaataccg
2201 catttaacct tcggagtatt acatatttct gataacatgg tgccagacgt
2251 gattgacata ctaaagataa tgaagaatga attatttaaa atggatatta
2301 cgaccagtta tacatatatg ttatcagatg gaatctacgt agcaaatgtt
2351 agtggagtat tatctacata ctttaaaatc tataacgtat tttataaaaa
2401 tcaaataact tttggccaat ccagaatgtt tattccgcac ataacattaa
2451 gcttcaataa catgagaaca gtaaggatag agactactaa attacaaatt
2501 aaatccattt atttaagaaa gattaagggt gatacagtgt ttgatatggt
2551 tgagtgagct aaaaacttaa cacactagtc atgatgtgac c