Sequence of DPV Rift Valley fever virus
Rift Valley fever virus gene for putative RNA-dependent RNA-polymerase, genomic RNA
ACC No: X56464
Dated: 1994-06-03 | Length: 6606 | CRC: -270561463
!!NA_SEQUENCE 1.0
ID RVFLRNA standard; RNA; VRL; 6606 BP.
XX
AC X56464;
XX
SV X56464.1
XX
DT 11-OCT-1991 (Rel. 29, Created)
DT 03-JUN-1994 (Rel. 39, Last updated, Version 5)
XX
DE Rift Valley Fever Virus L RNA segment genomic RNA for putative
DE RNA-dependent RNA-polymerase
XX
KW L RNA segment gene; RNA-dependent RNA polymerase.
XX
OS Rift Valley fever virus
OC Viruses; ssRNA negative-strand viruses; Bunyaviridae; Phlebovirus.
XX
RN [1]
RP 1-6606
RA Argentini C.;
RT ;
RL Submitted (30-AUG-1991) to the EMBL/GenBank/DDBJ databases.
RL C. Argentini, Inst of Virol and Enviromental Biol, Mansfield Road OX1 3SR,
RL Oxford, Oxfordshire, UK
XX
RN [2]
RX MEDLINE; 92020238.
RA Muller R., Argentini C., Bouloy M., Prehaud C., Bishop D.H.L.;
RT "Completation of the genome sequence of Rift Valley fever phlebovirus
RT indicates that the L RNA is negative sense and codes for a putative
RT transcriptase-replicase";
RL Nucleic Acids Res. 19:5433-5433(1991).
XX
RN [3]
RP 1-6606
RA Mueller R., Poch O., Bishop D.H.L., Bouloy M.;
RT "Rfit valley fever virus L segment: correction of the sequence and possible
RT functional role of newly identified regions conserved in RNA-dependant
RT polymerases";
RL J. Gen. Virol. 75:1345-1352(1994).
XX
DR SWISS-PROT; P27316; RRPL_RVFVZ.
XX
FH Key Location/Qualifiers
FH
FT source 1. .6606
FT /db_xref="taxon:11588"
FT /organism="Rift Valley fever virus"
FT /strain="ZH548"
FT /isolate="derivative M12"
FT CDS 19. .6468
FT /db_xref="SWISS-PROT:P27316"
FT /gene="L RNA segment"
FT /product="putative RNA-dependent RNA-polymerase"
FT /protein_id="CAA39836.1"
FT /translation="MDSILSKQLVDKTGFVRVPIKHFDCTMLTLALPTFDVSKMVDRIT
FT IDFNLDDIQGASEIGSTLLPSMSIDVEDMANFVHDFTFGHLADKTDRLLMREFPMMNDG
FT FDHLSPDMIIKTTSGVYNIVEFTNFRGDERGAFQAAMIKLAKYEVPCENRSQGRTVVLY
FT VVSAYRAWCMVYLELERTLKQREMVYRYRLALSVMDELRTLFPELSSTDEELGKTEREL
FT PAMVSSIQINWSVTESVFPPFSREMFDRFRSSPPDSEYITRIVSRCLINSQEKLINSSF
FT FAEGNDKALRFSKNAEECSLAVERALNQYRAEDNLRDLNDHKSTIQLPPWLSYHDVDGK
FT DLCPLQGLDVRGDHPMCNLWREVVTSANLEEIERMHDDAAAELEFAFGSKGQARERNRY
FT HRVHLNMGSDVLVYIAALGVNGKKHKADTLVQQMRDRSKQPFSPDHDVITYLNFSLHAL
FT VTCGQQMRTCTALSLVIRDSVGSPEDSSAILVRKGFHEIITEHYKFMGSRIGHGCQMVS
FT LIGAELSASVKQHVKPNYFVIKRLLGSGIFLLIKPTSSKSHIFVSFALSALAGPLISPL
FT PGFSSPTKMLGILLVTDFVSYKLSKLTNLCKCVSLMESSFSFWAEAFGIQAGTLVGDFV
FT PRSSDSAAMDASYMGKLSLLTLLEDKAATEELQTIARYIIMEGFVSPPEIPKPHKMTSK
FT FPKVLRSELQVYLLNCLCRTIQRIAGEPFILKKKDGSISWGGMFNPFSGRPLLDMQPLI
FT SCCYNGYFKNKEEETEPSSLSGMYKKIIELEHLRPQSDAFLGYKDPELPRMHEFSVSYL
FT KEACNHAKLVLRSLYGQNFMEQIDNQIIRELSGLTLERLATLKATSNFNENWYVYKDVA
FT DKNYTRDKLLVKMSKYASEGKSLAIQKFEDCMRQIESQGCMHICLFKKQQHGGLREIYV
FT MGAEERIVQSVVETIARSIGKFFASDTLCNPPNKVKIPETHGIRARKQCKGPVWTCATS
FT DDARKWNQGHFVTKFALMLCEFTSPKWWPLIIRGCSMFTKKRMMMNLNYLKILDGHREL
FT DIRDDFVMDLFKAYHGEAEVPWAFKGKTYLETTTGMMQGILHYTSSLLHTIHQEYIRSL
FT SFKIFNLKVAPEMSKSLVCDMMQGSDDSSMLISFPADDEKVLTRCKVAAAICFRMKKEL
FT GVYLAIYPSEKSTANTDFVMEYNSEFYFHTQHVRPTIRWIAACCSLPEVETLVARQEEA
FT SNLMTSVTEGGGSFSLAAIIQQAQCTLHYMLMGMGVSELFLEYKKAVLKWNDPGLGFFL
FT LDNPYACGLGGFRFNLFKAITRTDLQKLYAFFMKKVKGSAARDWADEDVTIPETCSVSP
FT GGALILSSSLKWGSRKKFQKLRDRLNIPENWIELINENPEVLYRAPRTGPEILLRIAEK
FT VHSPGVVSSLSSGNAVCKVMASAVYFLSATIFEDTGRPEFNFLEDSKYSLLQKMAAYSG
FT FHGFNDMEPEDILFLFPNIEELESLDSIVYNKGEIDIIPRVNIRDATQTRVTIFNEQKN
FT LRTSPEKLVSDKWFGTQKSRIGKTTFLAEWEKLKKIVKWLEDAPEATLAHTPLNNHIQV
FT RNFFARMESKPRTVRITGAPVKKRSGVSKIAMVIRDHFSRMGHLRGVEDLAGFTRSVSA
FT EILKHFLFCILQGPYSESYKLQLIYRVLSSVSNVEIKESDGKTKTNLIGILQRFLDGDH
FT VVPIIEEMGAGTVGGFIKRQQSKVVQNKVVYYGVGIWRGFMDGYQVHLEIENDIGQPPR
FT LRNVTTNCQSSPWDLSIPIRQWAEDMGVTNNQDYSSKSSRGARYWMHSFRMQGPSKPFG
FT CPVYIIKGDMSDVIRLRKEEVEMKVRGSTLNLYTKHHSHQDLHILSYTASDNDLSPGIF
FT KSISDEGVAQALQLFEREPSNCWVRCESVAPKFISAILEICEGKRQIKGINRTRLSEIV
FT RICSESSLRSKVGSMFSFVANVEEAHDVDYDALMDLMIEDAKNNAFSHVVDCIELDVSG
FT PYEMESFHGRSTLTCTPSTILIRTYTFYLTLHQTMISVQAFQVILDEGVLLIALVNNYL
FT RGSKANCWVRCESVAPKFISAILEICEGKRQIKGINRTRLSEIVEFVLNLPKIKSRIYV
FT LICRQCHGANFPPISVRRLMLEDIASVARRLIIVASFGS"
XX
SQ Sequence 6606 BP; 1928 A; 1339 C; 1573 G; 1766 T; 0 other;
X56464 Length: 6606 December 21, 2001 16:01 Type: N Check: 2295 ..
1 acacaaaggc gcccaatcat ggattctata ttatcaaaac agctggttga
51 caagactggt tttgttagag tgccaatcaa gcattttgac tgtacaatgc
101 taactctggc acttccaaca tttgatgttt ccaagatggt agatagaatt
151 accatagact tcaatctgga tgatatacaa ggagcatctg aaataggctc
201 aactttgcta ccctccatgt cgatagatgt ggaagatatg gccaattttg
251 ttcacgattt cacctttggc cacttagctg acaagactga cagactgtta
301 atgcgtgagt ttcccatgat gaatgacggg tttgatcatt tgagccctga
351 tatgatcatt aaaactacat ctggcgtata caacatcgtt gagttcacca
401 actttagggg agatgaaaga ggtgcattcc aggctgccat gatcaaactc
451 gctaagtatg aggttccttg tgagaacaga tctcagggca ggactgttgt
501 tctttacgtt gttagtgctt atcgggcatg gtgcatggtc tatctggagc
551 tagagcggac tctgaagcag agggagatgg tttataggta cagacttgct
601 cttagtgtga tggatgagct aaggaccttg ttcccagaac tgtcatccac
651 agatgaggaa ctagggaaga ctgagagaga gttgccagcc atggtgtcct
701 ccatccaaat aaattggtca gtcactgaat ctgtgtttcc acccttcagc
751 agagaaatgt ttgacaggtt tagatcctcc cctcccgatt cagagtatat
801 cacgaggata gtgagcagat gcctaataaa ttctcaagag aaactcatca
851 atagttcctt ctttgctgaa gggaatgata aggctctgag attttcaaaa
901 aacgctgaag agtgttcctt ggcagtagag agagccttaa atcagtatag
951 agcagaagac aaccttaggg acctcaatga ccacaagtca actattcagc
1001 tgcctccctg gctgtcctat catgatgtcg atggcaaaga tctgtgccct
1051 cttcagggac tagatgtgag aggggaccat cccatgtgca acttgtggag
1101 ggaagtggtc acctctgcaa acctagagga gattgagagg atgcacgatg
1151 atgcagcagc agaacttgag tttgctttcg ggagtaaagg acaggccaga
1201 gagagaaaca gataccatag agtccaccta aatatgggct cagatgtatt
1251 agtctacata gctgctttag gagttaatgg aaagaagcat aaagcagaca
1301 ctttagtgca acaaatgaga gacaggagta aacagccttt ctccccagac
1351 cacgatgtga tcacatatct gaatttctct ctgcatgctc tagtgacttg
1401 tgggcaacag atgaggacct gtacagccct ctctcttgtg ataagagatt
1451 cagttggcag cccagaggat tcatcagcca tccttgtcag aaaggggttt
1501 catgagatca taacagagca ctacaaattc atgggaagta ggataggtca
1551 tggttgccaa atggtcagct tgataggagc tgagctatca gcttctgtta
1601 aacaacatgt caagcctaac tactttgtga ttaaacgact actaggttct
1651 gggattttct tgctaatcaa gcccacttcc agcaaaagcc atatatttgt
1701 gtcttttgca ttaagcgctc ttgctgggcc tttgatctct ccacttccag
1751 ggttttcaag ccctactaag atgctgggga ttctgttagt tactgacttt
1801 gtttcttata agctaagcaa gcttaccaac ctctgcaagt gcgtttcatt
1851 aatggagtcc tccttctcat tctgggcaga agcatttgga attcaagctg
1901 gaactttggt tggtgacttt gttccaaggt cttcagactc tgcagcaatg
1951 gatgcctcat acatgggcaa actttcttta ttaacccttt tggaagacaa
2001 agcagcaact gaagagttac agactattgc aagatatata atcatggagg
2051 gctttgtctc gcccccagaa atcccaaaac ctcacaagat gacctctaag
2101 tttcctaagg ttctcaggtc agagctgcaa gtttacttat taaactgctt
2151 atgcagaact atccagagaa tagcaggtga gcccttcatt cttaagaaga
2201 aggatgggtc tatatcctgg ggtggcatgt tcaatccttt ttcagggcgt
2251 ccactgcttg atatgcaacc actcatcagc tgttgttaca atggttactt
2301 taaaaataaa gaagaagaga ctgagccttc gtccctttct gggatgtata
2351 agaaaatcat agaacttgag caccttagac cacagtcaga tgccttcttg
2401 ggttacaaag atccagaact tcccagaatg catgagttca gtgtttccta
2451 cttgaaggag gcttgcaatc atgctaagct agtcttgagg agcctctatg
2501 gacagaattt catggagcag atagacaacc agattattcg agagctcagt
2551 gggttgactc tagaaaggtt ggccacgctt aaggccacaa gcaactttaa
2601 tgagaattgg tatgtctata aggatgtagc agacaaaaac tacacaaggg
2651 ataaattatt agtgaagatg tcaaaatatg cctctgaggg aaagagccta
2701 gctatccaga agtttgagga ttgtatgagg cagatagagt cacaaggatg
2751 catgcatatt tgtttgttta agaaacaaca gcatggaggt ctgagagaga
2801 tctatgtgat gggtgcagag gaaagaattg ttcaatcggt ggtggagaca
2851 atagccaggt ccatagggaa gttctttgct tctgataccc tctgtaaccc
2901 ccccaataaa gtgaaaattc ctgaaacaca tggcatcagg gcccggaagc
2951 aatgtaaggg gcctgtgtgg acttgtgcaa catcagatga tgcaaggaag
3001 tggaaccaag gccattttgt tacaaagttt gccctcatgc tgtgtgagtt
3051 cacctctcct aaatggtggc cgctgatcat taggggatgc tcaatgttta
3101 ccaagaaaag gatgatgatg aatttgaatt atcttaagat cctggatggt
3151 catcgggagc ttgatattag agatgacttt gtgatggatc tcttcaaggc
3201 ttatcatggc gaggcagaag ttccatgggc ctttaaaggc aaaacatatt
3251 tggaaaccac aacagggatg atgcagggaa tactgcatta tacttcctca
3301 ctattacaca ccattcacca agaatacatc cggtccttgt cctttaagat
3351 attcaacctg aaggttgctc ctgagatgag caagagcctg gtttgtgaca
3401 tgatgcaagg atcagatgat agtagtatgc taatcagctt cccagctgat
3451 gatgagaagg ttcttaccag atgcaaagtg gccgcagcta tatgcttccg
3501 catgaagaag gagctgggag tgtaccttgc catttacccc tcagagaagt
3551 ccacagcaaa cacagatttt gtgatggagt acaattctga attttatttc
3601 cacacccagc atgttagacc aacgatcagg tggattgcag cttgttgcag
3651 cctgccagaa gtggaaacac tagtagcccg ccaggaagag gcctctaacc
3701 taatgacttc agttactgag ggaggtgggt cattctcctt agctgcaata
3751 attcagcaag ctcagtgtac tctccattac atgctgatgg gcatgggagt
3801 gtctgagcta ttcttagagt ataagaaggc agtgctgaag tggaatgacc
3851 ctggcctggg tttcttcctg cttgacaatc cttatgcgtg cggattggga
3901 ggtttcagat ttaatctctt caaagctatc accagaactg atttgcagaa
3951 gctatatgct ttcttcatga agaaggtcaa gggctcagct gctagggact
4001 gggcagatga agatgtcacc atcccagaaa cgtgtagcgt gagcccaggt
4051 ggcgctctaa ttcttagctc ctctctaaag tggggatcta ggaagaagtt
4101 tcagaaattg agagaccgtt tgaacatacc agagaactgg attgaactaa
4151 taaatgagaa tccagaggtg ctctatcggg ctcccagaac aggcccagaa
4201 atattgttgc gcattgcaga gaaagtccat agcccaggtg ttgtgtcatc
4251 attgtcttct ggcaatgcag tttgtaaagt catggcctca gctgtatact
4301 tcttatcagc aacaattttt gaggacactg gacgtcctga gttcaacttc
4351 ttggaggatt ctaagtatag cttgctacaa aagatggctg catattctgg
4401 ctttcatggt ttcaatgata tggagccaga agatatatta ttcttattcc
4451 cgaatattga ggaattagaa tcactggatt ctatagttta caacaaggga
4501 gaaatagaca tcatcccaag agtcaacatc agggatgcaa cccaaaccag
4551 ggtcactatc tttaatgagc agaagaacct ccggacatct ccagagaagt
4601 tggtgtcaga caagtggttt gggactcaga agagtaggat aggcaaaaca
4651 accttcctgg ctgaatggga aaagctaaag aaaattgtaa agtggttgga
4701 agacgctcca gaagcaactc tagctcacac cccactgaat aaccatattc
4751 aagttaggaa tttctttgct agaatggaaa gcaagcctag aacagtcaga
4801 ataacaggag ctccagtaaa gaagaggtca ggggttagta agatagctat
4851 ggttatccgt gaccatttct cccggatggg ccatcttcga ggtgtagaag
4901 accttgctgg tttcactcgt agtgtgtcag ctgaaattct caagcacttt
4951 ctattctgta tactacaagg tccatacagt gagagctata agctacagct
5001 aatctacaga gtcctaagct cagtgtcaaa cgttgagata aaggaatcag
5051 atggtaagac aaaaaccaac ttgattggaa tccttcagag atttctagat
5101 ggtgatcacg ttgtccccat aattgaagag atgggagccg gaacagtggg
5151 tggattcatc aagagacaac aatctaaagt tgtgcagaac aaagtggtct
5201 attatggggt tgggatttgg agaggcttca tggatggata tcaggtccat
5251 ctagagatag aaaatgacat aggacagccc ccaaggctta ggaatgtcac
5301 aactaactgt cagagcagcc catgggacct gagtattcca ataaggcaat
5351 gggcagaaga catgggggtc acaaacaacc aggattattc ctctaaatct
5401 agcagggggg ccagatattg gatgcattca ttcaggatgc aaggacctag
5451 caagccattt ggatgcccag tttatattat taagggtgat atgtcagatg
5501 tcatcagact gagaaaggag gaggtggaga tgaaagtacg gggctctact
5551 ctcaacttgt acaccaagca ccattctcat caggacctac acattctatc
5601 ttacactgca tcagacaatg atctcagtcc aggcattttc aagtcaatat
5651 cagatgaggg ggtggctcaa gccctgcaat tatttgagag ggagccaagc
5701 aactgctggg tgagatgtga gtctgtagcc ccaaaattta tatcagccat
5751 ccttgagata tgtgagggga agagacagat aaagggaatt aacagaacca
5801 gactctcaga gattgtgaga atttgttctg aatcttccct aagatcaaaa
5851 gtcggatcta tgttctcatt tgtcgccaat gtcgaggagg cccatgatgt
5901 tgattatgat gcgttaatgg atctaatgat agaggatgcc aagaacaatg
5951 cattcagtca tgttgttgac tgcatagagt tggatgttag tggcccttac
6001 gagatggagt cttttcatgg taggtctact ctaacttgta caccaagcac
6051 cattctcatc aggacctaca cattctatct tacactgcat cagacaatga
6101 tctcagtcca ggcatttcaa gtcatattag atgagggggt gctcttaata
6151 gccctagtta acaattattt gagagggagc aaagcaaact gctgggtgag
6201 atgtgagtct gtagccccaa aatttatatc agccatcctt gagatatgtg
6251 aggggaagag acagataaag ggaattaaca gaaccagact ctcagagatt
6301 gtagaatttg ttctgaatct tcctaagatc aaaagtcgga tctatgttct
6351 catttgtcgc caatgtcatg gcgcaaattt tcctccgata tctgtcagaa
6401 ggctgatgct ggaagacatc gcatcagtcg cacgaaggct gatcattgtc
6451 gcatcgttcg gtagctaaaa ctgaccgcta gcaaatccta gcctagttca
6501 aacatcgagc catattctct ttgccaatcg actgatctcg accttttacg
6551 acttccgcga catcttgttc tgcgccatat agatccatga ttgggcgcct
6601 ttgtgt