Sequence of DPV Seoul virus
Seoul virus 80-39 L gene for RNA-dependent RNA polymerase, genomic RNA
ACC No: X56492
Dated: 2003-05-09 | Length: 6530 | CRC: 247007056
!!NA_SEQUENCE 1.0
ID HVSLSEG standard; genomic RNA; VRL; 6530 BP.
XX
AC X56492;
XX
SV X56492.1
XX
DT 23-JUL-1991 (Rel. 28, Created)
DT 09-MAY-2003 (Rel. 75, Last updated, Version 6)
XX
DE Seoul virus 80-39 L gene for RNA-dependent RNA polymerase, genomic RNA
XX
KW L gene; RNA-dependent RNA polymerase.
XX
OS Seoul virus 80-39
OC Viruses; ssRNA negative-strand viruses; Bunyaviridae; Hantavirus;
OC Seoul virus.
XX
RN [3]
RP 1-6530
RA Yong Kang C.;
RT ;
RL Submitted (05-NOV-1990) to the EMBL/GenBank/DDBJ databases.
RL Yong Kang C., University of Ottawa, Dept of Microbiology & Immunology,
RL Faculty of Medicine, 451 Smyth Road, Ottawa Ontario K1H 8M5, CANADA.
XX
RN [4]
RX MEDLINE; 91327731.
RX PUBMED; 1840713.
RA Antic D., Lim B.U., Yong Kang C.;
RT "Nucleotide sequence and coding capacity of the large (L) genomic RNA
RT segment of Seoul 80-39 virus, a member of the hantavirus genus.";
RL Virus Res. 19(1):59-65(1991).
XX
DR GOA; P27314.
DR SWISS-PROT; P27314; RRPL_SEOU8.
XX
FH Key Location/Qualifiers
FH
FT source 1. .6530
FT /db_xref="taxon:12557"
FT /mol_type="genomic RNA"
FT /organism="Seoul virus 80-39"
FT /strain="Seoul 80-39"
FT /segment="L"
FT /clone="1"
FT /clone="2"
FT /clone="3"
FT /clone="4"
FT /clone="6"
FT /clone="7"
FT /clone="8"
FT /clone="L3'"
FT /clone="L2-PL1"
FT /clone="L1a-DA2"
FT /clone_lib="M13mp18"
FT /clone_lib="M13mp19"
FT CDS 37. .6492
FT /db_xref="GOA:P27314"
FT /db_xref="SWISS-PROT:P27314"
FT /gene="L"
FT /product="RNA-dependent RNA polymerase"
FT /protein_id="CAA39847.1"
FT /translation="MEKYREIHRDLKEFTINSLTAVECMDYLDRLYAVRHDIVDQMIKH
FT EWSDNKDSEEPISKVLLFAGIPNNVITALEKKVIPDHPSGKTLRSFFKMTPDNYRITGS
FT LIEFVEVTVTADVDKGIREKKMKYELGLKYLEQELMTFFHRGELQNPYKITFKVVAVRT
FT DGSNISTQWPSARNDGVVQYMRLVQAEISYVREHLVKTEERAALEAMFNLKFNISSLKT
FT QPYFIPEYKGIDLIRPDIDGLVNYAQSWMSKTQEFSFFEVKGSAVFDCFNENEQGHIVK
FT YPMSRHPRNFLLIQCTVLTAYKPATILSDQLDSRRACIQFLNLIPETPASILAHDMAHR
FT YINLTRDDLLAYYAPRIQFNPTQNIKEPGTFKLTSNMMRPESKIMLDMLSQHEPRENLG
FT KSIESLNISSHIVQSDCVSLITKILSDLELNISEPSSHEQITAKHTHVDTVLDKFFQNE
FT TQKYLIDILKKTTAWHIGHLVRDITESLIAHSGLRRSKYWSIHAYNNGSVILFILPSKS
FT LEVAGSFVRFMTAFKLGPGLVDKDNLDSILADGDILWGVSKIMSLDLNRLLALNIAFEK
FT ALLATATWFQYYTEDQSQFPLQHSIRSVFAYHFLLAICQKMKLCAIFDNLRYLIPAVTS
FT LYSGFPSLVEKLFERPFKSALEVYVYYNIKSLLVALAQNNKARFYSKVKLLGLTVDQST
FT VGASGIYPSFMSRVVYKHYKSLISEVTTCFFLFEKGLHGNVNEEAKIHLETVEWATKFK
FT EKEDKYGEMLVEHGYTIGELVESSELAVQQLYCQDAVELAANELNRVLIAKSQVVANSI
FT LNKYWEEPYFSQTRNISLKGMSGQVQEDGHLSSSTTIIEAIRYLSNSRNNPNVLQLYEE
FT TRHQKAQARIVRKFQRTEADRGFFITTLPTRCRLEIIEDYYDAISKNVAEEYISYGGER
FT KILCIQAALEKALRWASGESFIELSNGKFIRMKRKLMYVSADATKWSPGDNSAKFRRFT
FT AALHNGLPDDRLKNCVIDALRHVYKTDFYMSRKLRHYIDSMDTYEPHVRDFLNFFPDGH
FT HGEVRGNWLQGNLNKCSSLFGVAMSLLFKEIWTRLFPELDCFFEFAHHSDDALFIYGYL
FT EPADDGTDWFLFVSQQIQAGKLHWFNVNTEMWKSMFNLHEHILLLGSIKISPKKTTLSP
FT TNAEFLSTFFEGCAVSIPFIKILLGSLSDLPGLGYFDDLAAAQTRCVKAMDLGASPQIS
FT QLAVSLSTSKVERLYGTSIGMVNYPGTYLRTKHSETPIPLGGSGAMSIMELSTAGIGMS
FT DKNLLKQALIGYMHKHQKQMSYILGLFKFLMDLSGETFQHERLGQFSFIGKVQWKIFTP
FT KSEFEFSDMYSQKFLKVWSEQHPTYDYIIPKGRDNLLIYLVRKLNDPSIITAMTMQSPL
FT QLRFRMQAKQHMKVCRLDGDWVTFREVLAAANSFAESYEPSQNDIDLFQTLTSCTFSKE
FT YAWKDFLNNVHCDVIPTKQVQRAKVARTFTVREKDRIIQNSIPAVIGYKFAVTVDEMSD
FT VLDTAKFPDSLAVDLKTMKDGVYRELGLDISSPDVMKKVAPMLYKSAKSRVVIVQGNVE
FT GTAEAICAYWLRNMSLIKTIKVKPHKEVLQAVSIFNRKEDIGQQKDLSALKLCIEVWRW
FT AKANNAPYRDWFHALWFEDKTFSEWLDRFIRVGVPPIDPEIQCAALMIADVKGDRSVLQ
FT LQANRRAYSGKQYDAYCVQTYNEETKLYEGDLRVTFNFGLDCARLEIFWDKKTYILETS
FT ITQKHVLKIMMEEVSKELVRCGMRFNTEQVNGVKHLVLFKTDSGFEWGKPNIPCIVYKN
FT CALRTGLRTNQAINHKFMITIKDDGLRAIAQYDEDSPRFLLAHAFHTIRDVRYQAVDAV
FT SNVWFTHKGIKLYLNPIISSGLLEYFMKNIPAAIPPAAYSLIMNRAKISVDLFMFNDLL
FT RLINPGNTLDLSGLEITGEGYSTVNSLSSRLWSEEMSLVDDEEEMDDEFTIDLQDVDFE
FT NIDIEADVEHFLQDESAYTGDLLIMSEETEVKKMRGIIKLLEPVKLIKSWVSRGLSIEK
FT VYNPVNIILMTRYISKNFNFSGKQVSLLDPYDLTELESIVKGWGESVVDQFDSLDLEAQ
FT NLVQKQGIVPEDVIPDSLFSFRHTMVLLRRLFGQDSVSTFY"
XX
SQ Sequence 6530 BP; 2126 A; 1072 C; 1380 G; 1952 T; 0 other;
X56492 Length: 6530 December 5, 2003 15:01 Type: N Check: 8202 ..
1 tagtagtaga ctccggaaga gacaaatcaa aaaaagatgg agaaatatag
51 agaaatacac agggatctga aggagtttac tattaactca ttaacagccg
101 tggaatgcat ggattacttg gataggctct atgctgtccg gcatgacatt
151 gttgaccaga tgataaaaca tgaatggtca gacaataaag acagcgagga
201 gccaataagt aaggtattgc tgtttgctgg gatacctaat aatgtcataa
251 cagcattgga aaaaaaggtt atccctgatc atccaagtgg taaaacactg
301 cggtcttttt ttaagatgac acctgacaac tatcgaataa caggttcctt
351 aatcgagttt gtggaggtaa ctgtgactgc agatgtagat aagggtatca
401 gagagaagaa aatgaaatat gagctaggtc tgaaatatct agagcaagaa
451 ctcatgacat tttttcatag gggagaacta caaaaccctt ataaaattac
501 atttaaagta gttgcagtcc ggacagatgg atcaaatatt tcaacacaat
551 ggcccagtgc aaggaatgat ggtgtcgttc aatacatgag attggtacag
601 gcagaaatca gttatgtaag ggaacatttg gttaaaactg aagaaagagc
651 tgcattagaa gcaatgttta acttgaaatt caacataagt tctctaaaga
701 cacagcctta ttttatccct gaatataaag ggattgatct gattagacct
751 gatatagatg ggttagtgaa ctatgcccaa agctggatgt caaagaccca
801 agaattctct ttctttgaag taaaaggttc agctgtgttt gattgtttta
851 atgagaatga acaagggcac attgtaaaat acccaatgtc ccggcacccg
901 aggaactttt tactcatcca atgcactgta ttaacagcat acaaacctgc
951 aactatactt tctgatcagc ttgatagccg tagggcctgc attcaatttt
1001 taaacctcat cccagaaacc cctgcatcta ttcttgcaca tgatatggca
1051 cacagataca tcaatttgac tagagatgat ttattagcat attatgcacc
1101 tagaatccaa tttaacccaa cccaaaatat taaagaacca ggcaccttta
1151 aattaacatc aaatatgatg aggcctgagt caaagattat gctggatatg
1201 ctaagtcaac atgaacctcg agaaaatctg gggaagtcaa tagaaagttt
1251 aaacatcagt agtcatattg tacagtcaga ttgtgttagc ctaatcacaa
1301 aaattttgtc agatttagag cttaatattt ctgaacctag tagccatgag
1351 cagattacag ctaaacacac acatgttgat actgtattgg ataaattttt
1401 tcaaaacgag actcagaagt atctaattga tattctaaag aagaccacag
1451 catggcatat cgggcattta gttagggata ttactgagag cttgattgca
1501 cattctggat tgaggaggtc taaatattgg tcaatccatg cttataataa
1551 tggaagtgta atattgttca tactcccttc aaaatctctt gaggttgcag
1601 gttcgtttgt gcgatttatg actgctttta aattaggtcc tgggctagtt
1651 gataaagaca atttggattc aatacttgca gatggtgata tcttatgggg
1701 agtctcaaaa attatgagtc tagatctgaa caggttactt gctttgaata
1751 tagcttttga gaaagcacta cttgcaacag ctacatggtt ccaatattac
1801 actgaggatc agtcacaatt tccattgcaa cattctatcc ggtcagtatt
1851 tgcttatcat tttttgcttg ctatttgcca aaagatgaaa ttatgtgcaa
1901 tctttgacaa cctaaggtat ctgatacctg ctgtgacatc tttgtattct
1951 ggctttcctt ctttggttga aaaactgttt gagagacctt ttaaaagtgc
2001 tttagaagtc tatgtgtatt ataacatcaa aagtctgctt gtcgcactgg
2051 ctcaaaataa taaggctaga ttttattcga aagttaaact tctcggattg
2101 actgttgacc aatctacagt tggtgcaagc ggtatctatc catcctttat
2151 gtcacgagtt gtttataaac attataagag tttaatttca gaagtgacaa
2201 cttgcttttt tctttttgaa aagggtttgc atgggaatgt gaatgaagag
2251 gctaaaatac atctggaaac tgtggaatgg gcaacaaagt tcaaagaaaa
2301 ggaggataag tatggtgaga tgttagttga acatggttat acaataggag
2351 agcttgtaga atccagtgaa ctagcagtcc aacaactata ttgtcaagat
2401 gcagttgagc tggctgccaa tgaattgaac cgagttctta tcgcaaagtc
2451 tcaggtggtt gctaatagta tcttaaataa gtattgggaa gagccatatt
2501 ttagccaaac aaggaatatt agtttaaaag gcatgtcagg ccaagtacaa
2551 gaggatggac atttgtcgtc atccactaca ataattgaag ctataagata
2601 tctgtctaat tcaaggaaca atcctaacgt tcttcaacta tatgaagaaa
2651 ctagacatca gaaggcacaa gctagaattg tgaggaagtt tcagaggaca
2701 gaagctgatc gaggtttttt cattacgaca ctaccaacaa gatgtcgtct
2751 tgagattatt gaggactatt atgatgcaat atcaaaaaac gtagcagagg
2801 aatatatctc atatggtgga gaaaggaaaa ttctctgtat ccaggcggcc
2851 cttgaaaaag ctctccgctg ggcatctgga gagagcttta ttgagctcag
2901 caacgggaaa tttataagga tgaagagaaa acttatgtat gtcagtgctg
2951 atgccactaa atggtctcca ggtgataatt cagcaaaatt caggcgattc
3001 actgctgccc ttcataatgg actgcctgat gacaggttga aaaactgtgt
3051 cattgatgcc ttgcgccatg tatataagac tgacttttat atgtctagaa
3101 aacttagaca ctatattgat tctatggata cttatgaacc tcatgtcaga
3151 gactttttaa atttctttcc agacgggcat catggagagg tacgaggcaa
3201 ttggttgcag ggtaacttga acaagtgttc atcattgttt ggtgtggcaa
3251 tgtccttatt atttaaagaa atttggacaa ggttatttcc agaattagac
3301 tgcttttttg aatttgctca tcattcagat gatgcacttt tcatatatgg
3351 ctacttagaa ccagctgatg acgggactga ttggttctta tttgtatccc
3401 agcagattca agccggaaaa ttgcattggt ttaatgtaaa tacagagatg
3451 tggaaaagta tgtttaatct gcatgaacac attcttctgt taggatcaat
3501 taaaatatcc ccaaagaaga caacattatc gccgacaaat gctgagtttt
3551 tgtctacatt ttttgagggt tgtgctgtat caattccctt tattaaaatc
3601 cttcttggct cactatctga cctaccaggt cttggctatt tcgatgatct
3651 tgctgctgcc cagacgaggt gcgtcaaagc aatggattta ggagcatcac
3701 ctcaaatctc acaacttgca gtctcactta gtacgagtaa ggttgagaga
3751 ttatatggga catcaatagg catggttaat tatcctggca catatttaag
3801 gacaaaacac tctgaaactc caattccact gggaggaagt ggtgcaatgt
3851 caataatgga actttcaaca gccggtatag gtatgtctga caaaaattta
3901 ctgaaacaag cacttattgg ttatatgcat aaacaccaaa agcaaatgag
3951 ttacatcttg gggctcttca agtttttaat ggatctctct ggtgagacat
4001 ttcagcatga aaggctaggc cagttttcat ttataggaaa agttcaatgg
4051 aagatattca cacccaaatc agagtttgaa ttctctgaca tgtattctca
4101 gaagttttta aaggtttgga gtgaacagca tcctacatat gattacatta
4151 ttcctaaagg tcgtgataat cttcttattt atcttgtgag aaaattgaat
4201 gacccaagca ttataacagc tatgactatg caatcacctt tacaactcag
4251 atttaggatg caagcaaaac aacatatgaa ggtttgcaga ctagatgggg
4301 actgggtaac atttagagag gtacttgcag cagcaaacag ttttgctgag
4351 agctatgaac ctagtcaaaa tgatattgat ttatttcaaa cattgactag
4401 ctgcacattt tctaaagagt atgcatggaa agattttttg aataatgtac
4451 actgtgatgt gataccaaca aagcaagtac aacgtgcaaa agttgcacgt
4501 acattcacag tgagagaaaa ggaccgaatt attcaaaaca gcattccagc
4551 tgttattggt tacaagtttg cagtaacagt tgatgaaatg tctgatgtgc
4601 tagacacagc aaagttccca gattctctgg cagttgacct aaagacaatg
4651 aaagatggag tctataggga attgggttta gatatctctt ccccagatgt
4701 tatgaagaaa gtggcaccta tgttgtataa gagtgcaaaa tcacgggttg
4751 tcattgtcca ggggaatgtg gaaggaactg cagaggcaat ctgtgcatac
4801 tggttaagga atatgtcatt gattaagaca attaaagtta aaccccataa
4851 agaagtgctc caggctgtat ccatatttaa tagaaaagaa gatatcggtc
4901 aacagaagga tttgtcagca ctaaagttat gtattgaagt ttggaggtgg
4951 gcaaaagcaa ataatgcacc atatagggac tggttccatg cattatggtt
5001 tgaagacaaa acattttcag agtggctaga tagatttatc agagtaggtg
5051 tgcctcctat tgatccagaa attcagtgtg cagcattgat gattgcagat
5101 gtcaaaggtg acaggtcagt gttacaactc caagccaata gaagagcata
5151 ttcagggaaa caatatgatg catattgtgt acagacttat aatgaagaga
5201 caaagcttta tgaaggggat ctaagagtaa ccttcaattt tggattagat
5251 tgtgcacggc ttgagatatt ttgggataaa aaaacttata ttcttgagac
5301 atccatcaca cagaaacatg ttttaaaaat catgatggag gaggtttcga
5351 aagagctagt taggtgtggg atgcgattta atactgagca agttaatggt
5401 gtaaagcacc ttgtgttgtt caagacggat tcaggttttg aatggggtaa
5451 gcctaatatt ccatgtattg tatacaaaaa ctgtgcattg aggacaggct
5501 tgaggacaaa ccaggctatc aaccataagt ttatgatcac aattaaggat
5551 gatggtctca gggcaattgc acagtatgat gaagatagcc cacggtttct
5601 tttagcacat gctttccata ctatccgtga tgttcgctat caagcagttg
5651 atgcagtaag taatgtgtgg ttcacacata aggggataaa gctatacttg
5701 aacccgatca tttcatcagg actgctagag tactttatga aaaatatacc
5751 tgctgctatt ccaccagctg cttattcatt aataatgaat cgtgcaaaaa
5801 tttctgtgga cctttttatg tttaatgact tacttagact aataaaccca
5851 ggtaacacac ttgacttgtc tggtcttgaa ataacaggtg agggttatag
5901 tacagtaaat agtctttcta gtagattatg gtcagaagaa atgagccttg
5951 ttgatgatga agaggagatg gatgatgagt tcacaataga cctacaggat
6001 gtagattttg aaaatattga tatagaagct gatgtagagc atttcttaca
6051 ggatgagagt gcttatacag gtgatctatt gattatgtca gaagaaacag
6101 aagtaaaaaa gatgagaggg ataattaagc ttttagaacc tgtaaagtta
6151 ataaagagct gggtttcaag gggattgtct attgaaaagg tatacaaccc
6201 agttaacatc atactaatga ctaggtatat atcaaaaaac tttaactttt
6251 caggcaagca ggtatcctta ttagacccat atgatttaac tgagcttgag
6301 agtattgtta agggatgggg tgagtctgtt gtggatcagt ttgattccct
6351 tgacttagaa gcccagaatc tagttcaaaa gcagggtatt gtacctgagg
6401 atgtgattcc agactcgttg ttttccttta gacatactat ggtcctatta
6451 cgccggctgt ttggacagga ttcagtttct acattctatt aatcattcac
6501 ttcattttca ttttgcggag tctactacta