Sequence of DPV Tulip mosaic virus

Tulip mosaic virus gene for coat protein

ACC No: X63630

Dated: 1994-07-25 | Length: 1479 | CRC: -134633879

                !!NA_SEQUENCE 1.0
ID   TMVCPRNA   standard; RNA; VRL; 1479 BP.
XX
AC   X63630;
XX
SV   X63630.1
XX
DT   25-JUL-1994 (Rel. 40, Created)
DT   25-JUL-1994 (Rel. 40, Last updated, Version 2)
XX
DE   Tulip mosaic virus gene for coat protein
XX
KW   coat protein; NIb gene; nucleic inclusion b.
XX
OS   Tulip mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1479
RA   Namba S.;
RT   ;
RL   Submitted (30-JAN-1992) to the EMBL/GenBank/DDBJ databases.
RL   S. Namba, Lab of Plant Pathology, Faculty of Agriculture, University of
RL   Tokyo, 1-1-1 Yayoi Bunkyo-ku, Tokyo 113, JAPAN
XX
RN   [2]
RP   1-1479
RA   Oshira K., Namba S., Miyagawa M., Kusumi T., Tsuchizaki T.;
RT   "Nucleotide sequence of the coat protein coding region of tulip mosaic
RT   virus RNA";
RL   Virus Genes 8:165-167(1994).
XX
DR   SPTREMBL; Q88600; Q88600.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1479
FT                   /db_xref="taxon:35284"
FT                   /organism="Tulip mosaic virus"
FT   CDS             <1. .1257
FT                   /codon_start=1
FT                   /db_xref="SPTREMBL:Q88600"
FT                   /note="coat protein coding region"
FT                   /protein_id="CAA45178.1"
FT                   /translation="ALSNTFEQLGLNYNFDSRTTKKEDLWFMSHKGLERDGIYIPKLEP
FT                   ERIVSILEWDRSIEPVHRLEAICASMIEAWGYTELLHEIRRFYYWVLNQAPYTELSKEG
FT                   KAPYLSEVALTALYMGKESESIEIEKYIHQIDNWCDHDDIESVQFQADETINAGRRDVA
FT                   STSGSKSVATPAAESSQKDKDVDAGTTATFEIPRLKAISSKLVLPKFRGKKIVNLEHLL
FT                   NYNPEQVDLSNTRSTHKQFDAWFEGVKADYELDDAQMGVVCNGLMVWCIENGTSPNING
FT                   MWVMMDGESQVEYPIRPIIEHAKPTLRQIMAHFSSLAEAYIEKRNYERPYMPRYGLQRN
FT                   LTDMSLARYAFDFYEMTSKTSNRAREAHIQMKAAALRNSNSKLFGLDGNVGTQGEDTER
FT                   HTTDDVNRNMHTLMGARGI"
FT   mat_peptide     <1. .450
FT                   /note="NIb"
FT                   /product="nucleic inclusion b"
FT   mat_peptide     451. .1254
FT                   /product="coat protein"
XX
SQ   Sequence 1479 BP; 483 A; 262 C; 346 G; 388 T; 0 other;

X63630  Length: 1479  December 21, 2001 16:02  Type: N  Check: 3870  ..

       1  gcattgagca acacgttcga gcagttgggt ttgaattaca attttgactc
      51  acgaactacg aagaaagaag acttgtggtt tatgtcacat aaaggcttag
     101  agcgtgatgg aatatacata ccaaaattag agccggagcg tattgtgtca
     151  attctggagt gggataggtc cattgaacca gtccacagat tggaagctat
     201  ctgtgcatcg atgatagaag cgtggggtta tacagaattg ttacatgaaa
     251  tacggagatt ttattattgg gtgttaaatc aagcgccata cacggaactg
     301  tctaaagaag gaaaagcgcc ttatctatct gaagtggcac tgacggctct
     351  atatatgggc aaggaatcag aaagtattga aatcgaaaaa tatatccacc
     401  aaattgacaa ttggtgtgat catgatgaca ttgaatcagt tcagtttcaa
     451  gcagacgaaa caatcaatgc tggtagaaga gacgtagcat caactagcgg
     501  tagcaaatca gttgccacac cagctgctga atcttctcaa aaagacaaag
     551  atgttgatgc aggcacaaca gctacattcg aaattccaag actgaaggcc
     601  atatcgtcaa agttggtgct accaaaattt cgtggaaaga aaatagtaaa
     651  cttggaacat ctattaaact acaacccgga gcaagtggat ctatcaaaca
     701  caagatccac gcataaacag tttgatgcgt ggtttgaggg tgttaaagca
     751  gactatgaac tagatgatgc tcaaatgggt gttgtttgta atggattaat
     801  ggtttggtgc attgaaaatg ggacatcacc gaacataaat ggaatgtggg
     851  ttatgatgga tggtgagtca caagttgaat acccgataag accaatcatc
     901  gaacacgcga aacccacttt gcgccagata atggcacact tttcatcgct
     951  agctgaggcg tacattgaga agagaaatta tgaaagacca tacatgccca
    1001  gatatggtct acagcgaaat ttaaccgaca tgagtttggc aagatatgca
    1051  tttgactttt atgagatgac ttcaaaaact tctaatcggg ctagagaagc
    1101  acatatccaa atgaaggcag ctgcattacg caattcaaac agcaagttat
    1151  ttggattgga tggtaatgtc ggaacacaag gagaggacac ggagagacac
    1201  actactgatg atgttaatag gaacatgcac accctcatgg gagcgcgcgg
    1251  tatttaattt gtctcggttc gaaagaccct acgaactata atatatatta
    1301  gttgtactat gtattcaatc aacccgtaat ggtatccttc ctttagctta
    1351  ttctcataag caccagtgag gtgttacctt ccagtgtgtt tattgaggat
    1401  gagaatcgag cttgtttgtg tgcggagttc accagagagg ttacctcgtg
    1451  tgtgatttcg gctaatttac aagtgagag