Sequence of DPV Barley yellow mosaic virus
Barley yellow mosaic virus RNA for polyprotein RNA1
ACC No: X69757
Dated: 1993-01-25 | Length: 7648 | CRC: -79168007
!!NA_SEQUENCE 1.0
ID BAYMVRNA1 standard; RNA; VRL; 7648 BP.
XX
AC X69757;
XX
SV X69757.1
XX
DT 08-JAN-1993 (Rel. 34, Created)
DT 25-JAN-1993 (Rel. 34, Last updated, Version 5)
XX
DE Barley yellow mosaic virus RNA for polyprotein RNA1
XX
KW capsid protein; helicase; p1 protein; polyprotein; proteinase; replicase;
KW RNA 1.
XX
OS Barley yellow mosaic virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Bymovirus.
XX
RN [1]
RP 1-7648
RA Peerenboom E.;
RT ;
RL Submitted (11-DEC-1992) to the EMBL/GenBank/DDBJ databases.
RL E. Peerenboom, Max-Planck-Institut fuer Zuechtungsforschung,
RL Carl-von-Linne-Weg 10, 5000 Koeln 30, FRG
XX
RN [2]
RP 1-7648
RX MEDLINE; 92268893.
RA Peerenboom E., Proels M., Schell J., Steinbiss H.H., Davidson A.D.;
RT "The complete nucleotide sequence of RNA 1 of a german isolate of barley
RT yellow mosaic virus and its comparison with a japanese isolate";
RL J. Gen. Virol. 73:1303-1308(1992).
XX
DR SWISS-PROT; Q04574; POL1_BAYMG.
XX
CC Barley yellow mosaic virus is a Bymovirus type member.
XX
FH Key Location/Qualifiers
FH
FT source 1. .7648
FT /db_xref="taxon:12465"
FT /organism="Barley yellow mosaic virus"
FT /strain="BaYMV-G"
FT CDS 174. .7412
FT /db_xref="SWISS-PROT:Q04574"
FT /gene="RNA1 BaYMV"
FT /product="polyprotein RNA1"
FT /product="P1"
FT /product="C1 (helicase)"
FT /product="NIa (proteinase)"
FT /product="NIb (replicase)"
FT /product="capsid protein"
FT /protein_id="CAA49412.1"
FT /translation="MEQTLAQAVSRRGKTNTPMAEERKPFSPMNFSANFVAPELFYSAN
FT VRKIKNIFRERSTTRFLDAISSDFELVAFLTLSPAHLMQLETTLRQEIRSCVVPIVTSD
FT ASFETVAVIKTALDGMRFHFGHTTLEKGWMSMMRHAESCLQESSSSAVNDLQMQIKRVG
FT SLLLSGKNRVESCELSVLNLTARRFRIEYGLNGTYFGEHVAMLLDLKRYIYGTVPKEFC
FT WAKTKKHSLFTTPKWIKRTPIDCFLFCLRVIPILHRFGVAISLLYWSCVAALNFPAFMA
FT FLFKRQFAKYLAHSFAKHSIYFIFLTIIAILWSFRTFASQKPKIVLQARSTAEKEKKLM
FT MILASVVGITYLFDYDIAEALGNCLHKISRLSSYLLDDHQGIASRMFGASYGLQAGDSA
FT EDAVTTIISDLLSVTFKIVDEDASQGTVEDASETTFHSWVGVNTLAGRNMSRPLQYDVN
FT KTYALTPQNVQLQARAMADANNCWSMVVGHTGSGKSTYLPVQYSNYLSTKSDRRQQILI
FT CEPTQAATENVCAGVAANLGRAVYGRHEGWSRMGDHCIQVMTYGSALQCHAMDPSFIST
FT FDAIFLDEAHDVKEHSLVFESICDTFKSVRKFYVSATPRDGSVCPEAARKYPLHVETSV
FT CDSYRKFIAAQGGGDLLDISKHDTALVFLAGRPECIKAANAWNASVTGEKRAFPLSSDN
FT FATDFSMLTERLKTHKTIIFTTNIIETGVTLSVDCVVDFGHTMRPCLDLNQKSLRLDRR
FT RVTRNERQQRIGRAGRLKDGYAIVCGDVDRAVNVISPDVLYGAALLSFKHNVPFYMNET
FT FESSWLEGVTKAQADTMTIFKLPIFLTRDLINADGSVAREFLDVLKKHQFTTSDIKQAP
FT SVTAKHIFPTWASYFSLHQALHYGDDKDEIPHELRYARVPFSVTTLSKFDWPALALACE
FT KHRASMSNVFAGIEEPARVVTLQTNPANIQASITHLTHMSKNYKTLIENNQHVRQSMMT
FT NVMFKWFSSTRITKDLDRNLRRCTDNLSVVEATLSSLRQILAGNTQVHATPHMQSTLED
FT IIELQASDTLTEESLANALGIFVPKCNLFLLLATKGFKLVYVVCILLLVNLVYTGLRKW
FT REHLKQKGSNEILTNTMPVSEGGEILAEVMKMEPKMRKNIKRDMDAAVESKLCGFTFVF
FT PDDDKIGLEGKGNKYRPREDARLMYSTREDATFDAWNEKAKERRKKVTDKAEPELRRAY
FT EKRPYFNFYDLQTDSNILEAIFYTTEGDEFFRTADPNRDMNLVADKLRSFLDTKLVVGH
FT HQRKLLEETANVVIKDTKGTAHKMEISQHDPDFLKQNGSGKVGYPEHRGQFRQEGVAVT
FT GDYDLEAEFGTDTDEISFGASTGILLSQVGVDVATRVGRICIGTFNMNCYFYSDWILVP
FT GHLQDRSGNVTIQFPDQTVQTTTDALNANGVKRFYGLDVIAIRRPAILRPRTKLVKAFA
FT IEEPVIAQMVFVDAQGVRKFTQSDWARKEENSGRWSHKISTVLGMCGCPVLDVGKNRLI
FT GIHVATNYTKKRNEFQPFTQEVVDFINGPGTKIPYCPWVFDRPACGYSSHNALFEKPTT
FT LADVIHMQASDGLHNINNAIEGFGSSLKGQLVSPPTESTRQRFDKLFGSGSFELIGQMN
FT KGLIDKHVIVGENDDVYDFMREHPTFTWLKDFMNEYAPSVLSYSAYYKDLCKYNRAKHV
FT LTYNPEELHCATKGLIKMLEDAGLTQGSVRTPQQVVSDIQWNTSAGPSYQGKKRDLCAH
FT LSDDEVLHLAEVCRQQFLEGKSTGVWNGSLKAELRTIEKVEAEKTRVFTASPITSLFAM
FT KFYVDDFNKKFYATNLKAPHTVGINKFGRGWEKLHDKLNRPGWLHGSGDGSRFDSSIDP
FT FFFDVVKTIRKHFLPSEHHKAIDLIYDEILNTTICLANGMVIRKNVGNNSGQPSTVVDN
FT TLVLMTAFLYAYIHKTGDRELALLNERFIFVCNGDDNKFAISPQFDEEFGHDFSPELVE
FT LGLTYEFDDITSDICENPYMSLTMVKTPFGVGFSLPVERIIAIMQWSKKGGVLHSYLAG
FT ISAIYESFNTPKLFKSIYAYLLWLTEEHEAEILAAMTQSSTALPIPSMLDVYRLHYGDD
FT EIWLQAADPLTDAQKEAAHTAAADRARLDLADADRRRKVEADRVEAARVKKAADAVLKP
FT VTLTATRMPTEDDGKLKTPSGARIPSSAADGNWSVPATKQVNAGLTLKIPLNKLKSVPK
FT SVMEHNNSVALESELKAWTDAVRTSLGITTDEAWIDALIPFIGWCCNNGTSDKHAENQV
FT MQIDSGKGAVTEMSLSPFIVHARMNGGLRRIMRNYSDETVLLITNNKLVAHWSMKHGAS
FT ANAKYAFDFFVPRSWMNPQDIEVSKQARLAALGTGTYNTMLTSDTTNLRKTTNHRVLDS
FT DGHPELT"
XX
SQ Sequence 7648 BP; 2150 A; 1769 C; 1714 G; 2015 T; 0 other;
X69757 Length: 7648 December 21, 2001 16:02 Type: N Check: 1149 ..
1 aaaaaataaa acaaccctaa accaaaacaa acaaaacgaa acaaacacaa
51 acatcgcacg cttcccgagc tcacaacacc tgtagagtga tttttgtcat
101 cctactgttt gtaagctttt cagcaaatca acccgcttgc tttcgcacct
151 ccttcacctt cactctcgct cttatggagc aaaccctagc tcaagctgtg
201 tcacggagag gtaaaacaaa cacacctatg gcagaagagc ggaaaccttt
251 cagccccatg aatttttccg caaactttgt tgctcctgag ctcttttata
301 gtgctaatgt gaggaaaatt aaaaatatct tcagagagcg cagcacaact
351 cggtttctgg atgcaatttc aagtgatttt gagctcgttg cttttctcac
401 tttgagtccc gctcacttaa tgcaacttga gacaactctg cgccaagaaa
451 tacgttcgtg tgttgtgcca attgttacct ctgatgctag cttcgaaaca
501 gtcgctgtca tcaaaactgc tctggatggc atgagatttc actttggaca
551 caccactctt gaaaaggggt ggatgtctat gatgcgccat gcagagagtt
601 gcctgcaaga gagctcctct tcggctgtga atgatctgca gatgcagatt
651 aaacgcgttg gatcattgct cttgagtgga aaaaatcgcg tagaaagctg
701 cgaactatct gtcttgaacc tcacagcgcg acgtttcagg atcgaatatg
751 ggctaaatgg tacatacttt ggcgaacatg ttgctatgct actcgactta
801 aagcgttata tctatggtac cgtgccaaaa gagttttgtt gggcgaaaac
851 caaaaagcac tcgctattca caacccccaa gtggatcaag cgtacgccca
901 tcgactgttt cttgttctgt cttcgcgtta tccctatctt acataggttt
951 ggtgtggcca tatcactcct ttactggtcg tgtgttgctg ctctgaattt
1001 tcctgctttt atggctttct tatttaagcg tcagtttgct aagtatttag
1051 ctcactcttt tgctaaacac tccatctact ttatattttt aactataatt
1101 gctattttat ggtcttttcg cacttttgct tctcaaaaac caaaaatagt
1151 gcttcaggct aggagcacag cagaaaaaga gaaaaagctt atgatgattc
1201 tagctagtgt cgttgggatc acttatctct tcgattatga catagcagaa
1251 gctctcggga attgtctaca taaaataagc cgtctatcct catatcttct
1301 cgacgaccat caaggcatcg catcacgaat gtttggagcg agctatgggc
1351 ttcaggctgg cgatagtgct gaggatgcag ttacaacgat aatcagcgac
1401 ctactgtctg ttacttttaa aattgtggac gaagacgcat cacagggcac
1451 cgtggaggat gcatctgaga caacctttca cagttgggtt ggtgttaaca
1501 cacttgcagg tcgcaatatg tcaagaccac tccagtatga cgtcaataaa
1551 acatatgcac tcacacctca aaatgtccag ctccaagcgc gagctatggc
1601 agacgctaac aactgctggt caatggttgt tggtcataca ggatctggga
1651 agtcaacata cttacctgtg cagtactcca attacttatc caccaagagt
1701 gataggcgac agcagattct tatctgcgag ccaactcagg ctgccactga
1751 gaacgtttgc gctggcgttg ctgccaatct tggcagagct gtttacgggc
1801 gccatgaggg ttggtccaga atgggggatc attgcattca agttatgacg
1851 tatggttccg cgctccagtg tcatgctatg gaccctagct tcatatcaac
1901 tttcgacgca atcttccttg atgaagcaca cgacgtcaaa gagcactctc
1951 tagtctttga gagcatttgt gacacattta aatccgttcg aaagttctat
2001 gtttcagcca ctcctagaga tggaagtgta tgtcctgaag cagccaggaa
2051 atatccttta catgttgaaa ctagcgtttg cgattcgtat cggaagttca
2101 ttgcagctca aggtggggga gatttgctgg acatctcaaa acatgacaca
2151 gctttagtct ttctagcagg acggcctgag tgtattaaag ctgctaatgc
2201 ctggaatgct agtgtcaccg gtgagaagcg cgcctttcct ttgtcaagcg
2251 acaactttgc taccgacttc tcaatgctca ccgagaggct caaaacacac
2301 aaaaccatca tcttcaccac gaacataatt gagacaggtg tcactcttag
2351 cgttgattgt gttgttgatt tcggccatac gatgcgccca tgtttggatc
2401 tcaatcaaaa atcattacgt cttgatcgac gcagagtgac gcgaaacgaa
2451 agacagcaga gaattgggcg agcaggtcgg ctcaaagacg ggtacgccat
2501 agtgtgtgga gatgttgata gggctgtaaa tgtcatctct cctgatgttc
2551 tttatggtgc cgctcttctg agttttaaac acaatgtgcc tttctacatg
2601 aacgaaacat ttgagagttc ctggttggag ggtgttacaa aggcacaagc
2651 tgacacaatg acaatattca agcttcctat atttctaaca cgagacctca
2701 ttaatgcaga tggctcagtt gctagggagt ttcttgatgt tttaaagaag
2751 catcaattca caacaagtga cataaagcaa gcaccaagtg tcacagccaa
2801 acatatcttc ccaacttggg cttcatactt ctctctccat caggcgcttc
2851 attatggtga tgacaaggat gagataccac acgagttgcg atatgcgcgc
2901 gttcctttct ccgtcacaac tttgagcaaa ttcgattggc cagccttagc
2951 tcttgcatgc gagaaacata gagcttccat gtcaaatgtg tttgctggca
3001 tcgaggaacc cgcacgcgtt gttactctac aaacaaatcc tgcgaacata
3051 caagcaagca tcacacattt aacgcatatg agcaagaact ataaaactct
3101 tattgaaaac aaccagcacg tgcgccaatc catgatgacg aatgttatgt
3151 tcaagtggtt ttcttccact cgcattacca aagatcttga taggaacttg
3201 cgaagatgca cggataacct ctcagttgtc gaggccacgc ttagctcact
3251 taggcaaatc ttagctggca acacgcaggt tcacgcaacg ccgcacatgc
3301 agagcactct tgaggatatt attgaactcc aggctagcga cacactcacg
3351 gaagaaagct tagcaaacgc acttggcatc tttgtcccaa agtgcaacct
3401 ctttctgctg ctagctacta aaggtttcaa gcttgtgtac gttgtctgca
3451 tcttacttct tgtgaacctt gtttacactg gtcttcgtaa gtggcgcgag
3501 catctcaagc aaaagggaag taacgaaatc ctaactaaca caatgccagt
3551 tagcgaaggg ggcgaaattc tcgctgaagt tatgaaaatg gagcctaaaa
3601 tgagaaagaa catcaagagg gatatggatg cagctgttga gagcaaacta
3651 tgtggcttca cttttgtttt tccagatgat gataaaattg gtcttgaagg
3701 caagggaaac aaataccgcc ctcgcgaaga cgctcgcctg atgtactcca
3751 ctagagaaga cgccaccttt gacgcctgga atgagaaagc gaaggaaaga
3801 cgcaagaaag taaccgacaa agctgagcca gagcttcgca gagcctatga
3851 gaagagacca tacttcaatt tctacgacct tcaaacagat agcaacattc
3901 tggaagctat tttctacacc actgaaggtg atgagttttt ccgaacagca
3951 gaccctaaca gggacatgaa cttggttgct gataaactgc gctcttttct
4001 cgatacaaag cttgttgttg gacaccatca gcggaagcta ctagaagaaa
4051 cagccaatgt tgttatcaag gacacgaagg gaactgcgca caagatggaa
4101 atttcacagc atgatccaga ttttctgaag cagaatgggt ccggcaaagt
4151 tgggtatcca gaacaccgag gacagtttcg gcaggaagga gttgccgtca
4201 caggggatta cgatcttgaa gctgagtttg gcaccgatac tgatgaaata
4251 agctttgggg cctctactgg aattttattg tcacaagttg gggtcgatgt
4301 tgcaactcga gttggaagaa tttgcattgg cactttcaat atgaactgtt
4351 acttctatag cgactggatt ctagttccag gacacctgca agatagatct
4401 ggcaacgtaa caattcaatt ccctgaccaa acagtgcaaa ccacaaccga
4451 cgcactcaac gcaaatggtg tgaaacgatt ctatggatta gatgtaatag
4501 caattcgtcg ccctgctatc ttgcggcctc gcaccaagtt ggtcaaagct
4551 tttgctattg aggaaccagt tatcgcacaa atggtctttg ttgatgcaca
4601 gggagtccgt aagttcactc aatctgattg ggccaggaag gaggagaatt
4651 ctgggcgttg gtcacacaag atctccactg ttcttggtat gtgcggatgc
4701 ccagtcttgg acgttggaaa gaacagatta atagggatcc atgtcgccac
4751 aaactacaca aagaagcgca acgagttcca acccttcact caggaggttg
4801 tcgactttat aaatggacct ggaacaaaaa tcccctactg cccatgggta
4851 tttgatagac cggcttgtgg gtattcatcc cacaacgctt tgttcgagaa
4901 accaaccaca ctggctgacg tcattcacat gcaggcttct gatggtttgc
4951 acaacatcaa caatgccatt gagggttttg ggagctcact gaagggtcag
5001 cttgtgtcac cacctactga atccaccagg caacgtttcg ataagctgtt
5051 tggtagcggc agctttgagc tcattgggca gatgaacaaa ggcttaatcg
5101 acaagcacgt gattgttggg gaaaacgatg atgtttatga cttcatgcgc
5151 gagcacccaa catttacttg gttgaaagat ttcatgaatg aatatgcgcc
5201 cagtgttttg tcttattctg cttactacaa ggacctttgt aagtataatc
5251 gtgcaaaaca cgtgctcact tacaacccag aagagctcca ttgtgcgacg
5301 aaaggactga tcaagatgtt ggaagacgct ggcttgacac aaggcagtgt
5351 gaggacaccc caacaagttg tttcggacat tcaatggaac acttccgctg
5401 gaccaagtta tcaagggaag aaacgcgacc tctgtgccca cttgagcgat
5451 gacgaggtgc tgcatcttgc tgaggtttgt cgtcaacaat ttcttgaggg
5501 caagtcaact ggagtgtgga acggttctct gaaagctgaa ttgagaacca
5551 ttgagaaagt tgaggcggag aaaacgcgcg ttttcacagc ctctcccata
5601 acaagcctgt ttgccatgaa attctacgtt gatgacttta acaagaagtt
5651 ctatgctacc aatctgaaag ccccccacac tgttggcatc aataagttcg
5701 gtaggggatg ggaaaaattg catgacaagc ttaatcgccc tggatggttg
5751 cacggcagtg gggatggttc taggttcgat agctctatcg atcctttctt
5801 ctttgacgtt gtgaaaacta ttcgtaagca ctttctccct tctgagcatc
5851 ataaagccat tgatctcata tatgatgaga ttctcaacac aaccatctgc
5901 ctggctaatg ggatggttat caggaagaat gttggaaaca atagcgggca
5951 gcctagtact gttgttgaca acacacttgt gcttatgact gcattcctct
6001 acgcatacat tcacaagaca ggggatcgtg agttagcctt gctaaacgag
6051 cgtttcatct ttgtttgcaa cggtgatgac aataagtttg ccatatctcc
6101 gcagtttgat gaagagtttg ggcacgattt ttccccagaa cttgttgaac
6151 ttggacttac gtatgagttt gatgacatca ctagcgacat ttgcgagaat
6201 ccttacatgt ccctcactat ggttaaaact ccttttggtg ttggtttctc
6251 tcttcccgtg gaaagaatca tagccataat gcagtggtcc aagaaagggg
6301 gggttttgca ctcatattta gctggcatct ctgcaattta cgaatccttc
6351 aacacaccaa aactcttcaa atcaatctat gcgtaccttc tttggctcac
6401 tgaggagcac gaggcagaaa ttcttgcagc catgactcaa tcctcaaccg
6451 cccttcctat accatcaatg ctcgatgttt atcggttgca ctatggtgat
6501 gatgaaattt ggctgcaagc agctgatcct ctcactgatg cgcaaaaaga
6551 agctgcacac actgccgcag ctgatagagc acgcctcgac ctagccgacg
6601 ctgaccgtag acgtaaagtt gaagctgacc gtgtggaagc ggcaagagtc
6651 aaaaaggcag ctgatgctgt gctaaaacca gttaccctca cagcaacacg
6701 catgcccaca gaagatgatg gcaaacttaa aacgccatct ggtgctagaa
6751 taccatcatc agctgcagat ggtaactgga gcgtgccggc aacgaagcaa
6801 gttaacgctg gtttaacact caaaattccc ctgaataagc tcaaaagtgt
6851 gcctaagtct gttatggaac ataacaactc agttgcactt gaatctgagc
6901 taaaagcctg gactgatgct gtgcgcacaa gtttgggtat cacaactgat
6951 gaggcatgga tcgatgccct catacccttc atcggatggt gctgcaacaa
7001 tggcacctca gacaagcatg ctgagaatca agtaatgcaa attgacagcg
7051 gaaagggagc tgtcacagag atgagtctgt ccccatttat tgttcatgct
7101 cgaatgaatg gtggactccg aaggatcatg cgtaactaca gtgatgaaac
7151 cgtcttactc atcacaaaca acaaactagt tgcacattgg tcaatgaagc
7201 atggcgcttc tgcaaatgca aaatatgctt tcgatttctt cgtcccacga
7251 tcatggatga acccacagga catcgaagta tcaaagcaag cgcgcttagc
7301 agcacttgga actggaacgt ataacaccat gttaacttcc gacactacca
7351 atctgcgtaa gacaaccaac cacagggttc tggactcaga tggacaccca
7401 gaactaacct aaaccatcac cccgtgcctt atacatcacc cacccccact
7451 cataattcag tctttaaatt atgttcgtga cgtctttgta tcaggctcgg
7501 aacggttcta tgatccatat gcctttggca gttacaatgt cagcattctc
7551 attgaggagt atgacagcgt tgatcagccg ttttcaatca tccgtcgttg
7601 gatggtggtg cacttagtgc acttacgagt accagaaggt aataaaaa