Sequence of DPV Plum pox virus

Plum pox potyvirus gene for coat protein (NEB)

ACC No: X81075

Dated: 2006-11-14 | Length: 1270 | CRC: 1835027275

                
ID   X81075; SV 1; linear; genomic RNA; STD; VRL; 1270 BP.
XX
AC   X81075;
XX
DT   18-AUG-1994 (Rel. 40, Created)
DT   14-NOV-2006 (Rel. 89, Last updated, Version 3)
XX
DE   Plum pox potyvirus gene for coat protein (NEB)
XX
KW   coat protein.
XX
OS   Plum pox virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RA   Deborre G., Maiss E., Jelkmann W.;
RT   "Biological and molecular biological investigations of several plum pox
RT   virus (PPV) isolates";
RL   Unpublished.
XX
RN   [2]
RP   1-1270
RA   Maiss E.;
RT   ;
RL   Submitted (16-AUG-1994) to the EMBL/GenBank/DDBJ databases.
RL   E. Maiss, Inst. fuer Biochemie & Pflanzenvirol., Biologische Bundesanstalt
RL   fuer Land und Forstwirtschaft, Messeweg 11/12, 38104 Braunschweig, FRG
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1270
FT                   /organism="Plum pox virus"
FT                   /isolate="NEBRINGEN (NEB)"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12211"
FT   CDS             61. .1053
FT                   /partial
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q84916"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:Q84916"
FT                   /protein_id="CAA56966.1"
FT                   /translation="ADEREDEEEVDAGKPIVVTAPAATSPILQPPPVIQPAPRTTAPML
FT                   NPIFTPATAQPATKPVSQVSGPQSQTFGTYGNEDASPSNSNALVNTNRDRDVDAGSIGT
FT                   FTVPRLKAMTSKLSLPKVKGKAIMNLNHLAHYSPAQVNLSNTRAPQSCFQTWYEGVKRD
FT                   YDVTDDEMSIILNGLMVWCIENGTSPNINGMWVMMDGETQVEYPIKPLLDHVKPTFRQI
FT                   MAHFSNVAEAYIEKRNYEKAYMPRYGIQRNLTDYSLARYAFDFYEMTSTTPVRAREAHI
FT                   QMKAAALRNVQNRLFGLDGNVGTQEEDTERHTAGDVNRNMHNLLGVRGV"
FT   mat_peptide     61. .1050
FT                   /product="coat protein"
XX
SQ   Sequence 1270 BP; 381 A; 277 C; 293 G; 319 T; 0 other;

x81075 Length: 1270  14-NOV-2006  Type: N  Check: 7866  ..

       1  cttgaagctt tttacaacga cattaacgat gatggtgagt ccaacattgt
      51  tgtgcaccaa gctgacgaaa gagaagacga ggaggaagtt gatgcaggca
     101  agccgattgt agttactgca ccggcagcaa ctagcccaat acttcaacca
     151  cctccagtca tacagcctgc accccggact acggcgccaa tgctcaaccc
     201  cattttcacg ccagcaacag ctcaaccagc aacaaaacca gtttcacagg
     251  tgtcaggacc tcaatcgcaa acttttggaa catatggtaa tgaggatgca
     301  tcacctagca actcaaacgc gctagtcaac acaaacagag acagggacgt
     351  cgatgcagga tcaattggaa cttttacagt gccacgtttg aaggcaatga
     401  cttcgaaact atctctgcca aaggtgaagg gaaaggctat tatgaacttg
     451  aaccatttgg cacattatag tcctgcacag gttaacttgt caaacacgag
     501  agctccgcag tcttgtttcc aaacttggta tgaaggagtt aagcgagatt
     551  atgatgtcac ggacgatgaa atgagcatca ttttaaatgg tcttatggtt
     601  tggtgcatag agaatggaac atccccgaat atcaatggaa tgtgggtgat
     651  gatggatggg gaaacacaag tggagtatcc aataaagcca ttgttggatc
     701  atgtgaaacc cacttttaga caaattatgg cacatttcag taacgtggct
     751  gaagcgtata ttgaaaaacg aaattatgaa aaagcataca tgccaaggta
     801  tggaattcag cgcaacctga ctgactacag cctcgccaga tatgcctttg
     851  atttttacga aatgacctca acgacacccg tacgggcacg tgaagctcat
     901  atccagatga aggcagcagc attgagaaat gttcaaaatc gtttatttgg
     951  cttggatgga aacgtcggaa cacaagaaga ggacacagag agacacaccg
    1001  ctggtgatgt taatcgcaac atgcacaacc tcctcggtgt gaggggagtg
    1051  tagtggtctc ggtatctatc ataaactcta cctgggtgag agtctaatca
    1101  tccagttgtt tttagattcc tgttagcatc cttttctccg ctttaatagc
    1151  agtacattca gtgaggtttt acctccatat gttctagtct gttattgtcg
    1201  aacacaggcc cttgtatctg atgtggcgag tgcttcactc cattcgggtt
    1251  atagttcttg tgcaagagac