Sequence of DPV Indian peanut clump virus
Indian peanut clump virus RNA-1 sequence
ACC No: X99149
Dated: 1997-01-16 | Length: 5841 | CRC: 782752256
!!NA_SEQUENCE 1.0
ID IPCVRNA1 standard; RNA; VRL; 5841 BP.
XX
AC X99149;
XX
SV X99149.1
XX
DT 12-JUL-1996 (Rel. 48, Created)
DT 16-JAN-1997 (Rel. 50, Last updated, Version 5)
XX
DE Indian peanut clump virus RNA-1 sequence
XX
KW 15 kDa protein; methyltransferase; polymerase; RNA-1.
XX
OS Indian peanut clump virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Pecluvirus.
XX
RN [1]
RA Miller J.S., Wesley S.V., Naidu R.A., Reddy D.V.R., Mayo M.A.;
RT "The nucleotide sequence of RNA-1 of Indian peanut clump furovirus";
RL Arch. Virol. 141:2301-2312(1996).
XX
RN [2]
RP 1-5841
RA Mayo M.A.;
RT ;
RL Submitted (06-JUL-1996) to the EMBL/GenBank/DDBJ databases.
RL M.A. Mayo, Scottish Crop Research Institute, Virology, Invergowrie, Dundee,
RL Scotland, DD2 5DA, UK
XX
DR SPTREMBL; Q82718; Q82718.
DR SPTREMBL; Q82719; Q82719.
XX
FH Key Location/Qualifiers
FH
FT source 1. .5841
FT /db_xref="taxon:32629"
FT /organism="Indian peanut clump virus"
FT /lab_host="Phaseolus vulgaris"
FT /specific_host="Groundnut"
FT /strain="Hyderabad serotype"
FT CDS 133. .3525
FT /db_xref="SPTREMBL:Q82718"
FT /note="putative"
FT /product="methyltransferase"
FT /protein_id="CAA67586.1"
FT /translation="MAQSNIYSDMIDRYVNDETVVQNLFMTASSTTKSLLHDVIADRAA
FT NHLKSLEKKQKQKELVDVRRVLSSESLNALCSLYPEFNVITSNRERGSHTMAAVCRTLE
FT TLYIKSLLPVNDTVVWDVGGNWLTHVKYSTNQDVHCCCPLLDYRDAMRKQERILSLELF
FT ARNGKEKTEEFDACYQQIRNFENTRRTAISAGKNVVMNDRYCCDVFQNCAYEPDSGKLR
FT VAMGVHSVYDMTLQELVDGLERKKIEHFIGCFLFSPKLLLGQEEGELPFVNGRFKVKKG
FT KIRFFFLDDTTHGYEHDLNDYLEYIRKSFVVAKCGHVYMLELFSMRGDTVFFKLYDVTE
FT YSLSKTGFLSTLLPTRDHVFKAMPIPNTDEVIVPLYWIENGEVVVERRYLPKSLVCRGM
FT EWLMRNKANALQYETLLNYLVSTNVSAVFNGCQVREGLKTDPWILCKLAMTLLVREEFN
FT REKQKKVLEMLRLSGSEQISLKRIFKGVFEKFFGSVSLKARVLRTVARWCGVEFGSMKY
FT DVDVLPLYVEIEDSITLWRKGKLEGIEAYDMKDEVMRYNDKKQDVERLTQTLKDKVSED
FT GSASDSSSRLKKLAAFAVLASGKDTPLGRFISSRSASSNGSTETISSDQETVSPKISVP
FT DSPTEEVPPLILPYTVKKRWADYSSDSSDDVAAGEDFMSPVSTLVLRRRLPAPPVYPND
FT VQEAACLEYLWYLKCKIVCDFSAMFSIVCDFKDQLLHDGRCEFPKNAFFLKVGAETKWA
FT LKRPTSQQVGHQYCVKFSENDDHMELTPVSWKKQNDEVRSIFPQGLSDGWYMFSDLTFL
FT MNEWLIFNKLVAMYPTLQKNQLKVRLIDGVPGCGKSTWILNNCDLDKQVVLAEGREATD
FT DLRKRFTEKGFPRKRCEERVRTVHSFMLKPLTRGFNSFHFDEALMAHAGMIYICGRMLR
FT AREVICQGDSKQIPFINRVEQITLRYASFNVVEREYVRKTYRCPLDVIYYLNKKRYYQG
FT DDIVGFSKTTHSVDTKSKTSGFTSLVKLPKEPVHYLTFLQAEKEEVAKHLAGVKGATVS
FT TIHEAQGKTFECVNLVRLKMTDNELYPGGAKAEPYTIVGLTRHTRSLVYYSVVEDRLYE
FT DISALKDVMEDQLLKCSHSEQTK"
FT mRNA 3526. .5103
FT /note="putative"
FT /product="polymerase"
FT CDS 5168. .5542
FT /db_xref="SPTREMBL:Q82719"
FT /note="putative"
FT /product="15 kDa protein"
FT /protein_id="CAA67587.1"
FT /translation="MAKSDFFREERKRRVAILGEQAVCKVNGVPGYSCGMPPAVEQVFV
FT PVDNEEEAYMLVFPYDGCCGEKHYKLYNSLADISDDDLKLQCLERQRETLLTNFQKKLK
FT DYDSAIALLSEKFKKLRSKM"
XX
SQ Sequence 5841 BP; 1603 A; 996 C; 1464 G; 1778 T; 0 other;
X99149 Length: 5841 December 21, 2001 16:04 Type: N Check: 4215 ..
1 gtattctgtg gtgtttgttt ttggccttgg tcaagtacac aacattacag
51 gttcgcaatt cctgcaactt tcgctttgcg acgcggggca acctttgcta
101 tctggtgtca tttcattcgt gacgatatca gtatggcgca atctaacatt
151 tattctgaca tgattgacag gtatgtcaac gatgagacgg tggttcagaa
201 tctgtttatg acggcttctt ctaccacaaa atcgttgttg catgatgtca
251 tcgctgaccg tgcagctaac caccttaaaa gtttggagaa aaaacaaaaa
301 caaaaagagt tggttgatgt gagaagggtt ctgagttctg agtctttgaa
351 cgctttgtgt tcgttgtatc ctgagttcaa tgtcattaca agtaaccgtg
401 aacgaggtag ccatactatg gcagctgtgt gtcgaacgtt ggagactttg
451 tatataaaaa gtttgttacc tgtgaatgat actgttgtgt gggatgttgg
501 tgggaactgg ttaacgcatg taaagtattc cactaatcag gacgttcatt
551 gttgttgtcc tctgttggat tatagagatg ctatgcgtaa acaagagagg
601 attctgagtc ttgagttgtt tgctagaaat ggaaaagaaa aaaccgagga
651 attcgacgct tgttatcaac agatcaggaa tttcgaaaat actcggcgta
701 ctgctataag tgctgggaag aacgtggtta tgaatgatag atattgttgt
751 gatgtcttcc agaactgtgc ttatgaacct gactctggaa agttgagagt
801 cgctatgggc gtgcacagtg tgtacgatat gacacttcaa gagttagtcg
851 acgggttgga gaggaagaag attgaacatt tcattggttg ttttttgttc
901 tctccaaagc ttttgcttgg tcaggaagaa ggagagctac catttgttaa
951 tggcagattc aaagtgaaga aagggaagat tcggtttttc tttctggatg
1001 atacgactca tggttatgag catgacttaa atgattatct tgaatatatc
1051 agaaaatctt ttgtcgttgc taaatgtggt catgtttaca tgctagagtt
1101 gttctccatg aggggtgata cagttttttt taaactgtat gacgtcaccg
1151 aatatagttt gtcgaagact ggtttccttt ccacgctgct gcctactaga
1201 gaccatgtat ttaaagctat gcccataccg aatactgacg aggttattgt
1251 accactatat tggattgaaa atggagaagt agtggttgag aggcgttacc
1301 tgcccaaatc gctagtgtgt cgtggtatgg aatggttgat gcgaaataag
1351 gcgaatgcgt tacagtatga aacgttgttg aactatttag tatctacaaa
1401 tgtttctgct gtttttaatg gatgtcaggt gagagaaggt ttaaagacag
1451 atccttggat tttgtgcaaa ttggcaatga cattgttggt gcgtgaggaa
1501 tttaacagag aaaaacagaa gaaggtgctt gagatgctca gattaagtgg
1551 ttcagagcaa attagtctga agagaatatt caagggtgtt tttgaaaaat
1601 tttttggaag tgtttctcta aaggctcgcg tcttgaggac tgttgcccgt
1651 tggtgtggtg tcgaattcgg aagcatgaag tatgatgtag atgtgttgcc
1701 attgtatgtt gagatcgaag acagtatcac gttgtggaga aaaggtaaac
1751 tggaagggat tgaagcttat gacatgaaag atgaagtgat gcgctataat
1801 gacaagaagc aggatgtgga gcgccttacc cagaccctca aggacaaagt
1851 aagtgaagat ggatctgctt ctgactcttc ttccaggtta aagaagctgg
1901 cagcctttgc ggtacttgca agtggaaagg atactccttt ggggaggttt
1951 atctcatcaa gatccgcgtc cagtaatggg agtaccgaaa cgattagttc
2001 cgaccaggag actgtgtcac caaaaatttc tgttcctgat agtccgacag
2051 aagaagttcc gcccttgata ttgccttata ctgtcaagaa gcgttgggct
2101 gattactcga gtgatagcag tgacgacgtt gcagcagggg aagactttat
2151 gtcaccggtg tcaacattgg tcctccggag acgtctacct gccccccctg
2201 tgtacccgaa tgacgttcaa gaagctgctt gtctagagta cttgtggtat
2251 ttgaagtgca aaattgtctg tgacttctcg gcgatgtttt ctatcgtctg
2301 cgacttcaag gatcagctgt tacatgatgg aaggtgtgag ttcccaaaga
2351 atgccttctt tttgaaggtg ggtgctgaga caaaatgggc gttgaaacgt
2401 cccacttctc agcaggtcgg acaccaatac tgtgtgaaat tttctgagaa
2451 tgatgatcac atggagttga cccccgttag ttggaaaaag cagaacgatg
2501 aagtgcgtag tattttccct caaggattga gcgatgggtg gtacatgttt
2551 tctgacttga cttttttgat gaatgagtgg ttaattttca acaagttggt
2601 tgctatgtac cctactcttc aaaaaaacca actaaaagtt aggttgattg
2651 atggagtacc tggttgtgga aaatctacct ggattttgaa taattgtgat
2701 cttgataagc aggttgtgct ggctgaagga agagaagcga ccgatgatct
2751 gagaaagaga ttcactgaaa aggggtttcc tagaaagcgt tgtgaggaga
2801 gggtgagaac agtgcactcc tttatgctta aacccttgac gcgtggtttc
2851 aattcttttc actttgatga agctctcatg gcccatgctg gtatgattta
2901 tatttgcggg cgtatgttga gagctaggga agtgatctgt cagggtgatt
2951 ctaaacagat cccttttatc aatcgcgttg aacagattac cttaaggtat
3001 gcttcgttta atgtagttga aagggagtat gttagaaaga cttacaggtg
3051 cccattggat gtcatctatt acttaaataa aaagagatac tatcaaggtg
3101 atgatatcgt agggttctca aagacaacac attctgttga tacaaagtca
3151 aaaacttctg gattcacctc tttggtgaag cttccgaaag aacctgtgca
3201 ttatttgaca ttcctgcaag ctgagaaaga ggaagttgct aaacatttgg
3251 cgggagtgaa aggtgctacg gtgtcgacta ttcatgaggc gcaggggaag
3301 acgtttgaat gcgtaaatct ggtcaggttg aaaatgacag acaatgagtt
3351 atatcctgga ggggcaaagg cagagcctta cacaattgtt ggtttgacaa
3401 ggcataccag aagtcttgtc tactattctg ttgttgaaga caggctttat
3451 gaggatatct ctgcgttgaa ggatgtgatg gaggaccagt tgctgaagtg
3501 ctctcactct gagcagacca aatgacggtt tgggtcaaag tttgagtcca
3551 tcgtggtagc agatagaaag gtcatggccc ctgatgttgg ggatcttgtg
3601 accattcaag acttgtacga tcggactttc cctggtaatt ccactttgga
3651 ttcaagcttt gacgggtata ctgttgcttc ttctaaccta gagttagaga
3701 tttctaactg taagattgca cctaacaagt ctattagagg gttccaagaa
3751 aagatctgtt tctctccgag attgaggacc gctatgcctg agaagcgtca
3801 aggttccttt gcggagtcta ttttggctct gcgtaagaga aatatggcgt
3851 gtcccagact tcaagagtct gtgaatgaac atcagatagt tgatgataca
3901 ctggcgaaag ctttttcttg ttatttctcg gactcttttg tggatcaaag
3951 tccgttaata acagatgagg ctgctcttag gtggtgggaa aaacaatcaa
4001 ccacggcaaa aaatcaaatg ctcgctgatt ggcgttcttt ggatcaaatt
4051 gatgtgtgca cgtacaactt tatgatcaag aatgacgtta aaccgaagtt
4101 ggatttgaca ccccaaagtg aatatgcagc tcttcaaact gttgtctatc
4151 ctgaaaaaat agtaaacggt ttgtttgggc cgataattaa ggaaatcaat
4201 gaacgggtgt tgtcagctct taggccaaat gtgtttgtta acacgcggat
4251 gacttctgaa gagttgagtc gcacagccga gtatcttttt ccaggtgacg
4301 aattcgaggt tgttgaaatt gatttttcca agtatgacaa gtcaaaaact
4351 tcattgcaca tcagaatggt tataagactt tacgagcagt ttggtcttaa
4401 tggttatatg aagtatctat gggaaaaatc acaaactcag acagtcgtca
4451 aagatagaaa ctatggcgtt gaagcttaca tcttgtacca gcagaaatca
4501 ggcaactgtg acacatatgg ttctaacaca tattcttcta tgtttgcatt
4551 gcttgactgt ttgccaatgg aaaaagctgt atactctatc tttggtggtg
4601 atgactcttt aattcttttt ccaaagggga ctgttgttaa tgacccttgt
4651 ggtcgtttag cttctctgtg gaattttgac tgtaaatcaa tgaaatttaa
4701 agttccggct ttttgtggta agttcatgat tccagttgcc ggcaggtacc
4751 gttttgaacc cgaccctttg aagttgataa caaagctggg taacaagaca
4801 attgctatcg aaggaaaaac caaggctgag gtgagacgta acggttctaa
4851 acttttgtct gaaatttacg tgtctatttg cgataattat aaaaattttg
4901 atgacgcaag agttttagac gctttggctt atgctttggt agacagatac
4951 aaacctgaca tttgtccgaa agctgccttg tatagtttga gtaagttttt
5001 gaggtctttt gaatccttct gtgaattgtt cgatatttat tacgaaggtg
5051 aaagattagg ttttgatttc gttcctgtta ctgttcggaa agattatgag
5101 tggtagacta ttgacctttt cggtctttag tcgttgtttt gtgtttctgt
5151 gtttcctttc ttttgtgatg gcgaaatcag acttctttcg tgaggaacgc
5201 aaacgcaggg ttgcgatctt aggtgaacaa gctgtttgta aagtcaacgg
5251 agtgcctggc tactcttgtg gtatgccacc cgctgtagag caagtgtttg
5301 taccggtgga taatgaagag gaggcttaca tgcttgtgtt cccatatgac
5351 ggttgctgtg gagaaaaaca ctataagctg tataactcac tcgcggatat
5401 ctctgatgac gatttgaaat tgcaatgttt ggagagacag cgggagactt
5451 tgttgacgaa cttccagaag aaactgaaag attacgactc tgcaattgcg
5501 ctacttagtg agaagtttaa aaagttgcgt tctaagatgt aaagaattca
5551 gaatcccttc taaaagaaca aaaatgatta tgtcgagcct gatcagctcg
5601 aggcggtgcg agccatagag cacggttgtg ggtttaaact taaaaccctc
5651 tagtctcact tcctagtcgt tacaaggtta attgcaaaaa acccttgtat
5701 ctgattataa tgggagtgcc gacaagatgt cgggagtgtc aagacgcgac
5751 acttagtggc tggcgtagac tgctggtgcg cgaactcata gagttcgcgt
5801 aggtgcaaat cccccgccga tacggagcga tatccgtccc a