Sequence of DPV Potato virus A

Potato A potyvirus gene encoding coat protein, partial, isolate Afg

ACC No: Y10125

Dated: 1997-05-17 | Length: 1067 | CRC: -1435429726

                !!NA_SEQUENCE 1.0
ID   PAPAFGNIB  standard; RNA; VRL; 1067 BP.
XX
AC   Y10125;
XX
SV   Y10125.1
XX
DT   17-MAY-1997 (Rel. 51, Created)
DT   17-MAY-1997 (Rel. 51, Last updated, Version 2)
XX
DE   Potato A potyvirus gene encoding coat protein, partial, isolate Afg
XX
KW   coat protein; NIb replicase.
XX
OS   Potato virus A
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RA   Valkonen J.P.T., Rajamaki M., Puurand Y., Rabenstein F., Merits A.,
RA   Paulin L., Forster R.L.S., Saarma M.;
RT   "Variability of the coat protein and 3NTR genomic sequences with reference
RT   to biological properties of potato A potyvirus";
RL   Unpublished.
XX
RN   [2]
RP   1-1067
RA   Valkonen J.P.T.;
RT   ;
RL   Submitted (18-DEC-1996) to the EMBL/GenBank/DDBJ databases.
RL   J.P.T. Valkonen, University of Helsinki, Institute of Biotechnology,
RL   P.O.Box 56, Biocentre 1A, Viikinkaari 9, FIN-00014 University of Helsinki,
RL   FINLAND
XX
DR   SPTREMBL; O10631; O10631.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1067
FT                   /db_xref="taxon:12215"
FT                   /organism="Potato virus A"
FT                   /lab_host="Nicotiana tabacum"
FT                   /isolate="Afg"
FT                   /specific_host="Solanum tuberosum"
FT   CDS             <1. .863
FT                   /codon_start=3
FT                   /db_xref="SPTREMBL:O10631"
FT                   /product="NIb replicase"
FT                   /function="coat protein"
FT                   /protein_id="CAA71214.1"
FT                   /translation="IQFDEQMDEEDDMVYFQAGTLDAGETLAQKSEGRKKEGEGNSSKA
FT                   VAVKDKDVDLGTAGTHSVPRLKSMTSKLTLPMLKGKSVVNLDHLLSYKPKQVDLSNARA
FT                   THEQFQNWYDGVMASYELEESSMEIILNGFMVWCIENGTSPDINGVWTMMDDEEQVSYP
FT                   LKPMLDHAKPSLRQIMRHFSALAEAYIEMRSREKPYMPRYGLQRNLRDQSLARYAFDFY
FT                   EITATTPIRAKEAHLQMKAAALKNSNTNMFGLDGNVTTSEEDTERHTATDVNRNMHHLL
FT                   GVKGV"
XX
SQ   Sequence 1067 BP; 344 A; 207 C; 247 G; 269 T; 0 other;

 Y10125  Length: 1067  December 21, 2001 16:05  Type: N  Check: 468  ..

       1  ctatccagtt tgatgaacaa atggatgaag aagatgacat ggtgtatttc
      51  caagccggaa ctcttgatgc aggcgaaaca ctagcgcaga aatctgaagg
     101  taggaagaaa gaaggagaag gcaacagtag caaagctgtt gccgtgaagg
     151  acaaagatgt cgatttaggt actgctggga ctcattcagt accacgctta
     201  aaatcaatga catcaaaact gacactacca atgctcaaag gtaagagtgt
     251  cgttaaccta gatcacttgc tatcttacaa accaaagcaa gtagacttgt
     301  caaatgctag agccacccac gaacaattcc aaaactggta tgatggcgtt
     351  atggcaagtt atgagttaga ggaatcaagc atggagatca ttctaaatgg
     401  tttcatggta tggtgcattg agaatggaac ttctccagac attaatggag
     451  tctggaccat gatggatgat gaggaacaag tgtcatatcc attaaaaccc
     501  atgcttgacc atgcaaagcc ttctttaagg caaattatga gacatttcag
     551  cgcactcgca gaggcgtaca ttgagatgag aagtcgtgag aaaccataca
     601  tgcccaggta tggtcttcaa cgcaacctga gagatcaaag tttggcaagg
     651  tatgcttttg atttctatga gatcactgca accactccga tcagagccaa
     701  agaggcgcat ctgcagatga aagcagcagc gctgaagaat tcgaacacta
     751  atatgtttgg actggacgga aatgtcacaa cttcagaaga ggacacagaa
     801  aggcacacag caacggatgt taatcgcaac atgcatcacc ttctaggcgt
     851  gaagggggtg taaccgaagt gccgtactat tactaagtaa gagttcctgt
     901  tagtatcctt gtcttattat tagaatatgt ttatctttca acaagtatga
     951  tgttcgtgct ctcacctcgc aacagtgagt ttgagtggga aataaatact
    1001  agtattctat ggccttactt gttatataga cccaccacat agtgagattt
    1051  tatctcggtg actggtt