Sequence of DPV Potato virus A

Potato A potyvirus mRNA for NIb replicase and coatprotein and 3' UTR, isolate Alc

ACC No: Y11422

Dated: 1997-06-15 | Length: 1069 | CRC: 985046085

                !!NA_SEQUENCE 1.0
ID   PAPALC     standard; RNA; VRL; 1069 BP.
XX
AC   Y11422;
XX
SV   Y11422.1
XX
DT   15-JUN-1997 (Rel. 52, Created)
DT   15-JUN-1997 (Rel. 52, Last updated, Version 2)
XX
DE   Potato A potyvirus mRNA for NIb replicase and coatprotein and 3' UTR,
DE   isolate Alc
XX
KW   coat protein; CP gene; NIb gene; NIb replicase; polyprotein.
XX
OS   Potato virus A
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RA   Valkonen J.P.T., Rajamaki M., Puurand Y., Rabenstein F., Merits A.,
RA   Paulin L., Forster R.L.S., Saarma M.;
RT   "Structural and functional analysis of 21 Potato A potyvirus isolates";
RL   Unpublished.
XX
RN   [2]
RP   1-1069
RA   Valkonen J.P.T.;
RT   ;
RL   Submitted (05-FEB-1997) to the EMBL/GenBank/DDBJ databases.
RL   J.P.T. Valkonen, University of Helsinki, Institute of Biotechnology,
RL   P.O.Box 56, Viikki Biocentre 1a, FIN-00014 Helsinki, FINLAND
XX
DR   SPTREMBL; O11985; O11985.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1069
FT                   /db_xref="taxon:12215"
FT                   /organism="Potato virus A"
FT                   /isolate="Alc"
FT                   /lab_host="Nicotiana tabacum"
FT                   /specific_host="Solanum tuberosum"
FT   CDS             <1. .863
FT                   /codon_start=3
FT                   /db_xref="SPTREMBL:O11985"
FT                   /product="polyprotein"
FT                   /protein_id="CAA72228.1"
FT                   /translation="IQFDEQMDEEDDMVYFQAGTLDAGETPAQKSEGRKKEGEGNSGKA
FT                   VAVKDKDVDLGTAGTHSVPRLKSMTSKLTLPMLKGKSVVNLDHLLSYKPKQVDLSNARA
FT                   THEQFQNWYDGVKASYELEESSMEIILNGFMVWCIENGTSPDINGVWTMMDDEEQVSYP
FT                   LKPMLDHAKPSLRQIMRHFSALAEAYIEMRSREKPYMPRYGLQRNLRDQSLARYAFDFY
FT                   EITATTPVRAKEAHLQMKAAALKNSNTNMFGLDGNVTTSEEDTERHTATDVNRNMHHLL
FT                   GVKGV"
FT   mat_peptide     <1. .56
FT                   /gene="NIb"
FT                   /product="NIb replicase"
FT   mat_peptide     57. .860
FT                   /gene="CP"
FT                   /product="coat protein"
XX
SQ   Sequence 1069 BP; 343 A; 201 C; 250 G; 275 T; 0 other;

Y11422  Length: 1069  December 21, 2001 16:05  Type: N  Check: 1496  ..

       1  ctatccagtt tgatgaacaa atggatgaag aagatgacat ggtgtatttc
      51  caagccggaa ctcttgatgc aggcgaaaca ccagcgcaga aatctgaagg
     101  taggaagaaa gaaggagaag gcaacagtgg caaagctgtt gccgtgaagg
     151  acaaagatgt cgatttaggt actgctggga ctcattcagt accacgctta
     201  aaatcaatga catcaaaact gacactacca atgctcaaag gtaagagtgt
     251  cgttaaccta gatcacttgc tatcttacaa accaaagcaa gtagacttgt
     301  caaatgctag agccactcac gaacaattcc aaaactggta tgatggcgtt
     351  aaggcaagtt atgaattaga agaatcaagc atggagatca ttctaaatgg
     401  tttcatggta tggtgcattg agaatggaac ttctccagac attaatggag
     451  tttggaccat gatggatgat gaggaacaag tgtcatatcc attaaaaccc
     501  atgcttgacc atgcaaagcc ttctttaagg caaattatga gacatttcag
     551  cgcactcgca gaggcgtaca ttgagatgag aagtcgtgag aaaccataca
     601  tgcccaggta tggtcttcaa cgcaacctga gagatcaaag tttggcaagg
     651  tatgcatttg atttctatga gatcactgca accactccgg tcagagccaa
     701  ggaggcgcat ttgcaaatga aagcagctgc gctgaagaat tcgaacacta
     751  acatgtttgg actggacgga aatgtcacaa cttcggaaga ggacacagaa
     801  aggcacacag caacggatgt taatcgcaac atgcatcacc ttctgggcgt
     851  gaagggggtg taaccgaagt gccgtactat tattatatat aagagttcct
     901  gttagtatcc ttgtcctatt attagaatat gtttatcttt caacaagtat
     951  gatattcgtg ctctcatttc gcaatagtga gtttgagtgg gaagtaagta
    1001  ctagtattct atggccttac ttgttatata gacccatcac gtagtgagat
    1051  tttatctcgg tgaatggtt