Sequence of DPV Potato virus A
Potato A potyvirus RNA for helper component proteinase, partial, isolate M
ACC No: Y14123
Dated: 1998-01-08 | Length: 1374 | CRC: -349602967
!!NA_SEQUENCE 1.0
ID POPY14123 standard; RNA; VRL; 1374 BP.
XX
AC Y14123;
XX
SV Y14123.1
XX
DT 08-JAN-1998 (Rel. 54, Created)
DT 08-JAN-1998 (Rel. 54, Last updated, Version 1)
XX
DE Potato A potyvirus RNA for helper component proteinase, partial, isolate M
XX
KW HC-Pro gene; helper component proteinase.
XX
OS Potato virus A
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus.
XX
RN [1]
RA Rajamaeki M., Andreeva L., Merits A., Rabenstein F., Paulin L., Kreuze J.,
RA Forster R.L.S., Valkonen J.P.T.;
RT ;
RL Unpublished.
XX
RN [2]
RP 1-1374
RA Merits A.;
RT ;
RL Submitted (30-JUN-1997) to the EMBL/GenBank/DDBJ databases.
RL A. Merits, University of Helsinki, Institute of Biotechnology, Viikki
RL Biocentre 1, P.O.Box 56, FIN-00014, FINLAND
XX
DR SPTREMBL; O56997; O56997.
XX
CC Related sequence:Z21670
XX
FH Key Location/Qualifiers
FH
FT source 1. .1374
FT /db_xref="taxon:12215"
FT /organism="Potato virus A"
FT /isolate="M"
FT /lab_host="Nicotiana tabacum"
FT /specific_host="Solanum tuberosum"
FT CDS <1. .>1374
FT /codon_start=1
FT /db_xref="SPTREMBL:O56997"
FT /gene="HC-Pro"
FT /product="helper component proteinase"
FT /protein_id="CAA74555.1"
FT /translation="YSTGDVFWRGFNRTFLENKPINLDHVCSSDFSVEECGSIAALICQ
FT SLLPCGKITCRACAAKNLNMDEDTFKEFQTQRAREISAVIISKYPNFACVSQFIDRYFS
FT HQRVLNPNVNAYREILKIVGGFTQSPYTHIQELNEILVLGGRATPEQLSSASAHLLEIT
FT RFVRNRTDNIKKGSLALFRNKISAKAHVNTALMCDNQLDRNGNLIWGERGYHAKRFFSN
FT YFDIITPGGGYKQYIERRVPNGIRKLAIGNLIVTTNLGALREQLEGESIEKKAVTKACV
FT SMSDNNYKYPCCCVTLDDGTPLYSTFIMPTKNHLVIGNSGDPKFLDLPTDISTQMYIAK
FT SGYCYINIFLAMLVNVDESDAKDFTKKVRDITVPDLGEWPTLIDVATSCSLLSAFYPAT
FT SAAELPRILVDHDLKTMHVIDSYGSLNTGYHVLKANTVRQLIQFASNSLDSEMKHYRVG
FT "
XX
SQ Sequence 1374 BP; 445 A; 279 C; 302 G; 348 T; 0 other;
Y14123 Length: 1374 December 21, 2001 16:06 Type: N Check: 3396 ..
1 tattcaacag gggatgtttt ctggcgagga ttcaatcgaa cctttttaga
51 gaacaagcca atcaatctag atcatgtgtg ttcttcagac ttttctgtag
101 aagaatgtgg atctatagcg gcactgattt gccaatcact actaccatgt
151 ggcaaaataa catgccgagc gtgtgcagca aagaatctga acatggatga
201 ggacaccttc aaagagttcc agacacaaag agctcgggaa ataagcgcag
251 ttattataag caagtatccg aactttgcat gtgtctctca gttcattgat
301 cgatattttt cacatcagag ggtattaaat cccaatgtta acgcatatag
351 agaaatattg aagatagttg gcggcttcac gcaatcacca tacacacaca
401 tacaggagct caatgaaata ttggtcttgg gtggcagagc aactcctgaa
451 caattaagct ccgcatcagc acacttgcta gagataacaa ggttcgttag
501 gaacagaacg gacaacataa agaagggctc actagccctg tttaggaaca
551 agatctcagc aaaagcacat gtaaacacag ctttaatgtg tgacaaccag
601 ctagatagga atggtaactt aatatggggc gagagagggt atcatgccaa
651 gagattcttc tcaaattact tcgatatcat tacaccggga ggtgggtaca
701 agcagtatat tgagagaaga gttccaaatg gaatcagaaa acttgccatc
751 ggaaatctca tagttaccac aaacctagga gctctgcgag agcaactaga
801 aggggagtcg attgagaaga aggctgtcac aaaggcttgt gttagcatga
851 gcgataacaa ttataaatac ccatgctgct gcgttacatt ggatgatggc
901 actccactgt attcaacgtt tattatgcca accaagaacc atcttgtaat
951 tggtaactca ggtgacccaa agttcctaga cttgcccaca gacattagca
1001 cacaaatgta catagccaaa tcaggatact gttacataaa tatattcctg
1051 gctatgcttg tgaatgtgga tgagtctgat gccaaagact tcactaagaa
1101 ggttagagac atcacagtgc cagatctagg cgagtggcca actcttattg
1151 atgtggcaac aagttgcagt ctacttagtg cattttatcc tgctacaagt
1201 gccgctgagt tgccaagaat tctggttgat cacgatctca aaacaatgca
1251 cgtgattgat tcttatggct cactcaacac aggatatcat gtactaaagg
1301 cgaatacagt tcggcaattg atccaatttg cgagcaactc actagactct
1351 gaaatgaagc actacagggt tgga