Sequence of DPV Cowpea aphid-borne mosaic virus

Cowpea aphid-borne mosaic potyvirus cp gene and partial nuclear inclusion gene b, strain Monguno

ACC No: Y17822

Dated: 2000-03-02 | Length: 1254 | CRC: -346314742

                !!NA_SEQUENCE 1.0
ID   CMV17822   standard; RNA; VRL; 1254 BP.
XX
AC   Y17822;
XX
SV   Y17822.1
XX
DT   24-JUL-1998 (Rel. 56, Created)
DT   02-MAR-2000 (Rel. 62, Last updated, Version 3)
XX
DE   Cowpea aphid-borne mosaic potyvirus cp gene and partial nuclear inclusion
DE   gene b, strain Monguno
XX
KW   coat protein; nuclear inclusion protein b.
XX
OS   Cowpea aphid-borne mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1254
RA   van Boxtel J.H.J.;
RT   ;
RL   Submitted (21-JUL-1998) to the EMBL/GenBank/DDBJ databases.
RL   J.H.J. van Boxtel, John Innes Centre, Norwich Research Park, Norwich NR4
RL   7UH, UK
XX
RN   [2]
RA   van Boxtel J.H.J., Thomas C.L., Maule A.J.;
RT   "Phylogenetic analysis of two potyvirus pathogens of cowpea breeding lines:
RT   implications for obtaining pathogen-derived resistance";
RL   Virus Genes 20:71-77(2000).
XX
DR   SPTREMBL; O90709; O90709.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1254
FT                   /db_xref="taxon:12199"
FT                   /organism="Cowpea aphid-borne mosaic virus"
FT                   /strain="Monguno"
FT                   /specific_host="cowpea"
FT   CDS             <1. .1020
FT                   /db_xref="SPTREMBL:O90709"
FT                   /product="polypeptide"
FT                   /protein_id="CAA76872.1"
FT                   /translation="FYLWLLQKDEFKELASLGKAPYIAETALKKLYTDEQASEKELQRY
FT                   LQGILENYDDCEGEDVMLQSSRGQAELDAGQDKDKGRDSTAQPTQQKTSKQKEVKETER
FT                   DVASSSSGQLVPRLQKISKKMNLPTIAGKLILNLDHLIEYKPAQIDLYNTRASRAQLNK
FT                   WYAAIKEEYELDDDKMSVIMNGFMVWCIENGTSPDVNGVWTMMDGDEQVEFPLKPIVEN
FT                   AKPTLRQIMHHFSDAAEAYIEMRNSEGFYMPRYGLLRNLRDKSLARYAFDFYEVTSKTS
FT                   DRAREAIAQMKAAALSNVNTRMFGLDGNVATTSENTERHTATDVNQNMHSLLGMRHGQ"
FT   mat_peptide     <1. .192
FT                   /product="3' nuclear inclusion protein"
FT   mat_peptide     193. .1017
FT                   /product="coat protein"
FT   3'UTR           1021. .1248
XX
SQ   Sequence 1254 BP; 404 A; 252 C; 307 G; 291 T; 0 other;

Y17822  Length: 1254  December 21, 2001 16:06  Type: N  Check: 2728  ..

       1  ttctatcttt ggctgttgca gaaggatgaa tttaaggagc tagcaagtct
      51  tggaaaagct ccttacatag cagaaacagc cctcaagaag ctttacactg
     101  atgaacaagc atctgaaaaa gaactacaaa ggtacctcca gggcatcctc
     151  gaaaattatg atgactgtga aggagaggat gtcatgctcc aatccagtag
     201  aggacaagca gagctggatg caggtcaaga caaagacaaa gggagagata
     251  gcacagcgca accaacacaa caaaagacat caaagcagaa ggaggtcaag
     301  gaaacggaga gagatgttgc atcaagctcc tcaggacaac ttgtgccacg
     351  gttacaaaag atcagtaaga agatgaatct tccgacaatt gctggcaagc
     401  tcatcttgaa tctggatcat ttgatagagt acaaaccagc gcaaattgat
     451  ctatacaaca ctagagcatc aagggctcag ctcaacaagt ggtacgcagc
     501  catcaaggaa gagtatgagt tagacgatga caagatgtct gttatcatga
     551  atggttttat ggtgtggtgc attgaaaatg gaacctcacc tgatgtgaat
     601  ggagtatgga ccatgatgga cggagatgaa caagtggagt ttccacttaa
     651  gcccatcgta gaaaatgcaa aacccacact ccgacaaata atgcaccatt
     701  tctctgacgc agctgaagcg tatatagaga tgaggaattc cgagggattc
     751  tacatgccca ggtatggatt acttaggaat ttaagggaca agagcttagc
     801  aaggtatgct tttgacttct acgaagtgac ctctaaaact tctgatagag
     851  cacgagaagc aatagcacaa atgaaagcgg cagccctgtc gaacgttaac
     901  actaggatgt ttggcctgga tggaaacgtc gcgacaacta gtgagaacac
     951  tgagaggcac actgccactg atgtgaatca gaacatgcac tcccttcttg
    1001  ggatgaggca tgggcagtaa aggcttgggt tcagccctcg ccacagttat
    1051  cgtctcacgt ccttagctaa tggttggttt tagtagatag tacgcatata
    1101  tccagtttac tatatatgtt agtgtgggtt gcccaccagt acgtcatgtt
    1151  actttaattg aacttagcgg agaggccata ccccggttgg agtgctcaga
    1201  gtggttttac cacgcgtagt taccgagatt tgtgtatgaa aactctctaa
    1251  aaaa