Sequence of DPV Watermelon silver mottle virus
Watermelon silver mottle virus RNA for N and Nss proteins.
ACC No: Z46419
Dated: 2004-02-19 | Length: 3536 | CRC: -694163904
!!NA_SEQUENCE 1.0
ID TVNNSSPR standard; genomic RNA; VRL; 3536 BP.
XX
AC Z46419;
XX
SV Z46419.1
XX
DT 01-NOV-1994 (Rel. 41, Created)
DT 19-FEB-2004 (Rel. 78, Last updated, Version 2)
XX
DE Watermelon silver mottle virus RNA for N and Nss proteins.
XX
KW N protein; NSs protein.
XX
OS Watermelon silver mottle virus
OC Viruses; ssRNA negative-strand viruses; Bunyaviridae; Tospovirus.
XX
RN [1]
RP 1-3536
RA Heinze C., Maiss E., Adam G., Casper R.;
RT "The complete nucleotide sequence of the S-RNA of a new Tospovirus species,
RT representing serogroup IV.";
RL Phytopathology 0:0-0(1994).
XX
RN [2]
RP 1-3536
RA Adam G.;
RT ;
RL Submitted (01-NOV-1994) to the EMBL/GenBank/DDBJ databases.
RL Adam G., DSM-Deutsche Sammlung von Mikroorganismen und Zellkulturen, c/o
RL BBA, Messeweg 11/12, Braunschweig, Germany.
XX
DR GOA; Q88929.
DR SPTREMBL; Q88928; Q88928.
DR SPTREMBL; Q88929; Q88929.
XX
FH Key Location/Qualifiers
FH
FT source 1. .3536
FT /db_xref="taxon:43141"
FT /mol_type="genomic RNA"
FT /organism="Watermelon silver mottle virus"
FT 5'UTR 1. .67
FT 3'UTR 3472. .3536
FT CDS 68. .1387
FT /citation=[1]
FT /db_xref="SPTREMBL:Q88928"
FT /evidence=EXPERIMENTAL
FT /product="Nss protein"
FT /protein_id="CAA86554.1"
FT /translation="MSTAKNAASEFIKSYGTRDNRAVNDCYSVFTGEGVNFLNLFMHNN
FT AGIKSAFSINDLGRNEDVKIHEAEVVDSCHDYHYFEKFGLDITFCEHEMNLIVRKPGVK
FT NTGCKFTMHNQIFNPNSNILNMTPGTISEDAFYDRSKITSSGLLPSGWCLDECYKNNFY
FT IATNGDLTLDYGFSVMGKTTSYWRESMSREKILSVKQKCFSDNTVPTNRLLSTSTVKGI
FT QIGSELASDTTVILSCKQNLNIDLKSQYRISFHGIQEEGAFARTFCVPFENKSRMISFY
FT AKTVADNSNERTTLIIKVVTKTVDSHLVIPIRNXINCEKKIGARVGLVDFCDSDPNYNQ
FT LIVKNLLSVHTQFAINLSEVIQKPVIVFKMYDKELHNDYTEVSGRILNYQVDSERNVIS
FT SQRLLRFCPKSLSTLSYLGSIAPIQWKECLEHQHFVVKAE"
FT CDS complement(2644. .3471)
FT /citation=[1]
FT /db_xref="GOA:Q88929"
FT /db_xref="SPTREMBL:Q88929"
FT /evidence=EXPERIMENTAL
FT /function="viral nucleoprotein"
FT /product="N protein"
FT /gene="N"
FT /protein_id="CAA86555.1"
FT /translation="MSNVKQLTEKKIKELLAGGTADVEIETEDSTPGFSFKAFFDNNKN
FT IEITFTNCLNILKCRKQIFAACKSGKYNFCGKNIVATSVDVGPEDWTFKRTEAFIRTKI
FT VSMVEKSKNEAARQEMYGKIMELPLVAAYGLNVPASYDSCALRMMLCIGGPLPLLSSIR
FT GLAPIIFPLAYYQNIKKEKLGIKNFSTYEQVCKVAKVLSASQVEFKDDLDVMFKQAVKI
FT LSESNPGTASSISLKKYEDQVKYMDRVFSANLSVDDYGDHSKKSSKPSTSLEV"
FT misc_RNA 1385. .2646
FT /citation=[1]
FT /evidence=EXPERIMENTAL
FT /note="intergenic region"
XX
SQ Sequence 3536 BP; 1195 A; 590 C; 568 G; 1181 T; 2 other;
Z46419 Length: 3536 March 2, 2004 08:39 Type: N Check: 2889 ..
1 agagcaatcg aggcaaataa taattctaga aaaaacaacg ttagactcga
51 gtaatactat ttcaggcatg tctactgcaa agaatgctgc ttcggaattc
101 atcaaaagtt atggcacaag agacaacaga gcagttaatg attgctactc
151 tgtattcact ggagaaggtg tcaactttct caatttgttc atgcataata
201 atgcaggtat taaatctgca ttcagcatca acgatttggg caggaatgaa
251 gatgtcaaaa tccatgaagc cgaagttgtt gattcatgcc atgattatca
301 ttattttgaa aaatttggac tagacataac attctgcgag catgaaatga
351 acttaattgt aaggaaacca ggtgtgaaga acacaggctg caagttcaca
401 atgcacaatc aaatctttaa tccaaattcc aatatactga acatgacgcc
451 cggaacaatt tcagaagatg ctttctatga cagaagcaaa ataacatcta
501 gtggactact tccttcagga tggtgtttgg atgagtgcta taagaataat
551 ttctatatag ctaccaatgg agatcttacc cttgattatg ggttttctgt
601 aatgggaaaa acaacatctt actggagaga gagcatgtca agggaaaaga
651 tcttgtcagt taagcaaaaa tgcttttctg acaacactgt ccctaccaac
701 agattgctat ctacatcaac agtcaagggc atccaaattg gttctgaact
751 agcttctgat accacagtta tattatcatg caagcaaaat ttaaacattg
801 atttgaaatc ccaatatcgt atttcatttc atggtattca ggaagaaggg
851 gctttcgcaa ggactttctg cgtccctttt gaaaataaat ctagaatgat
901 cagtttttac gcaaaaactg ttgctgacaa cagtaatgag agaaccaccc
951 ttatcataaa ggtggttaca aagactgttg attcccatct tgtcattcct
1001 ataagaaaty atatcaattg tgaaaagaaa atcggagcaa gagtaggtct
1051 tgttgatttc tgtgatagtg atcccaatta caatcaattg attgtcaaga
1101 atctgttaag tgtccatact cagtttgcta tcaatttatc tgaagttatt
1151 caaaagccag tcatagtgtt caaaatgtat gataaagagc tccacaatga
1201 ttatacagaa gtttccggga gaatcctgaa ttaccaggta gattcagaac
1251 ggaatgttat ttcctctcaa agactcttga ggttctgccc taaatcacta
1301 tcgaccctga gttayttagg cagcattgca ccaattcaat ggaaagagtg
1351 tttggaacac cagcactttg ttgtgaaagc agaataaact tatttgaaac
1401 tcttatgcta tattaatatc tataaatagt atatcgcatg ttgtatgtct
1451 gcatttgtgc atttcaatta ataaattaat tttagttata aatccaagta
1501 tttgtatgct taggtatttt atttaagttt aagtttaata aagtaagttt
1551 atctactaga attgaataaa taaatagata ataaatatat aagtaaatga
1601 agctaaaaac caaaatcata aaattaagta aataaattta gtcatgaatc
1651 tgaatgtttg tgtgtctgag tgtttaattt aagttcaagt ttagtagtat
1701 gagtctgttt gtgtcgatta agtaaataaa catataaata agtgaaatta
1751 tcaaatcaaa agtttacaaa attaaataaa aactcataaa caaaaaaccc
1801 ataaaaatga aataacaaaa aaaccaaaaa gacctcgaaa ggggcaaatt
1851 tggcttcatt accctgagca atttctaatt cacctgtaag aataatggga
1901 tcatttggat catgtgtttt tgtttatgat catgatgaac aagagtttgc
1951 ttgaaattaa ttatagttgg aatcttttag gtcattcgtg taagttgcaa
2001 tgaaggatca ttattgttag ttagtttacc cttatcacat gattaataca
2051 aaattctaac atgctatgac cagttgatca tgatattaga attcatgtaa
2101 attatatatt ctgattgatt cgagcagctt tagatctgtc atctaattct
2151 aagattcttc atcagtattg atccttttat ctaactattt atgtgttcaa
2201 ccaaatcaat ctaaatcatt taaaaacttc taatctcaac aaattgtaaa
2251 gctaagtttg atcttacgat tgatcattac agttaaataa aatcatattt
2301 acagaaaatt ggccattgat ttgcctccga agaggtcttt ttttgttttt
2351 tattttttga tttttttggg ttttttggaa ttttttatat atatatatat
2401 tgtttattta tttgttttat ttattttatt gtttttattt attttattta
2451 tttattttat atctatataa gcacacacat aggtataact ctataatagc
2501 tactcgtata attaaaataa gtatatagtt atataagcac acacaaaaaa
2551 cttaaacaaa cataaataga tttattaaat tatatagtta agcataaaca
2601 caaacacaca tgtgcacata tatgcacagt tgacacttca aagttacact
2651 tccaaagaag tgctaggctt tgaacttttc tttgaatgat caccataatc
2701 atccacagaa aggttagcac tgaagaccct gtccatgtac ttaacttgat
2751 cctcatattt cttgagcgaa atagagctag ctgttccagg gttactctca
2801 ctgagtattt tgacagcctg tttgaacata acatccaaat catccttaaa
2851 ttcaacctgt gaagcagaaa gaaccttagc caccttacaa acttgctcat
2901 aggtggagaa gttctttata cctaactttt ctttctttat attttggtaa
2951 taagctaaag ggaaaataat cggtgccagt ccccttatac tagataaaag
3001 aggtagaggt cctccaatac ataacatcat cctcaaggca caagaatcat
3051 aagatgcggg cacattcaac ccataagcag caactaatgg tagttccatg
3101 attttcccat acatttcctg tctagcagct tcattcttgc ttttctccac
3151 catactaact atttttgtcc tgataaaagc ttctgtcctc ttgaatgtcc
3201 agtcctcagg tccgacgtca acacttgtag caacaatatt tttaccgcaa
3251 aaattatact taccgctctt gcaggctgca aaaatctgtt tcctgcattt
3301 taggatattc aagcagtttg tgaaagttat ctctatattt ttgttgttgt
3351 caaaaaaagc tttgaagcta aatccgggag tggagtcctc tgtttcaatt
3401 tcaacatctg ctgtaccacc agccaaaagt tccttgattt tcttttctgt
3451 gagctgctta acgttagaca tggtgtttac aaaggaaacg tctgatatgt
3501 tgtttgaact gatattatta gcgcctcgat tgctct