Sequence of DPV Groundnut rosette virus

Groundnut rosette virus RNA for orf[1,2,3,4]

ACC No: Z69910

Dated: 1996-09-30 | Length: 4019 | CRC: -1650025467

                !!NA_SEQUENCE 1.0
ID   GRVORFS    standard; RNA; VRL; 4019 BP.
XX
AC   Z69910;
XX
SV   Z69910.1
XX
DT   01-JUN-1996 (Rel. 47, Created)
DT   30-SEP-1996 (Rel. 49, Last updated, Version 4)
XX
DE   Groundnut rosette virus RNA for orf[1,2,3,4]
XX
KW   .
XX
OS   groundnut rosette virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Umbravirus.
XX
RN   [1]
RP   1-4019
RA   Taliansky M.E., Robinson D.J., Murant A.F.;
RT   "Complete nucleotide sequence and organization of the RNA genome of
RT   groundnut rosette umbravirus";
RL   J. Gen. Virol. 77:2335-2345(1996).
XX
RN   [2]
RP   1-4019
RA   Robinson D.;
RT   ;
RL   Submitted (28-FEB-1996) to the EMBL/GenBank/DDBJ databases.
RL   Robinson D., Scottish Crop Research Institute, Invergowrie, Dundee,
RL   Scotland, UK.
XX
DR   SPTREMBL; Q67683; Q67683.
DR   SPTREMBL; Q67684; Q67684.
DR   SPTREMBL; Q67685; Q67685.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .4019
FT                   /db_xref="taxon:47740"
FT                   /organism="groundnut rosette virus"
FT                   /strain="MC1"
FT                   /specific_host="Arachis hypogeae"
FT   CDS             13. .870
FT                   /db_xref="SPTREMBL:Q67683"
FT                   /gene="orf1"
FT                   /protein_id="CAA93799.1"
FT                   /translation="MATIRHIMDWLRPTFTPLAGVKSRQECIAHYGDDWALMITQSRMT
FT                   LSAEAQVNAWYEGGAEVNGSIPSVEGNAAAPQAAAVVAEPPHPSPAENEGEDASWVAAL
FT                   PAPPTYEVVQGRAPTLEEIHGASRLQIVPYTGRARVIGEDEVLPSPVLSSIWRATRCPG
FT                   RILRVLGTLLKPGACQRHLEDLREVQPQVCVGNPCEVKLQEEGAPMAYMNAQSIAMELR
FT                   AMFGWQAATPANRELGNRVARDILRDGCGATREQIWYMSSLALHMWFQPTLCDLAIKAG
FT                   AQNF"
FT   mat_peptide     837. .2528
FT                   /note="expressed by -1 frameshift as an extension of ORF1"
FT                   /gene="orf2"
FT   misc_signal     861. .966
FT                   /note="signal for -1 frameshifting"
FT   CDS             2641. .3396
FT                   /db_xref="SPTREMBL:Q67684"
FT                   /gene="orf3"
FT                   /protein_id="CAA93800.1"
FT                   /translation="MDTTPASRGQWPVGIMSSVINVFASGKSCNSGGAPRSSVRRGHRA
FT                   GAARDKSRGFDAPPRRPKGGVHPATTSKDPNKDIRGPPAPTPHKKYRGPAIPGEGRSGV
FT                   HTTRPRRRAGRSGGMDPRQLVAQPQQRWAKTEIPTERRAEIDGLLPSLLNTLDGQIQGD
FT                   AALLRYCVGAIKRELRRRWESVQPAHHVAASSGKPSPQLFNEAAQNAEDLSGDGKGCAG
FT                   QSVQQEVLHSGSGVPPVCADCGKPAANKW"
FT   CDS             2702. .3484
FT                   /db_xref="SPTREMBL:Q67685"
FT                   /gene="orf4"
FT                   /protein_id="CAA93801.1"
FT                   /translation="MSSQVAKAATQGELLEALYGEVTVQELQETNLGVLTPHRGDQRVV
FT                   FTPLLPPRTQTRISGVLRRLRPTRNTGGLLYLEKVVVVFTPHVPDDAPGEVEVWIHDSL
FT                   LPNLNSVGPRLRFPLNGGPRLMAFYPPYSIPLMDKSKEMPRCFAIVSELLSASYVGGGS
FT                   PFSLHIMWQPQVESLAHNYLMRPPRMQKICRGMVKDALGSLSSRKSYIAGAVSHRFALT
FT                   AANPLPISGDTAEEAGEASSGEPHWVPEATAPRVRKAT"
XX
SQ   Sequence 4019 BP; 970 A; 1061 C; 1176 G; 812 T; 0 other;

 Z69910  Length: 4019  December 21, 2001 16:07  Type: N  Check: 522  ..

       1  gggggtttca acatggcgac tataaggcac attatggatt ggctgcggcc
      51  aacattcaca cctcttgctg gtgtaaaatc ccggcaagag tgtattgcgc
     101  attatgggga tgactgggcc ctaatgatca cccagtccag aatgaccctt
     151  tccgctgagg cccaggtgaa cgcctggtat gaggggggag ccgaagtgaa
     201  cggctccatt ccctcagtgg aagggaacgc agccgcccca caggctgctg
     251  cggtggttgc tgagccaccg cacccctccc ctgcggagaa cgagggggaa
     301  gatgcaagct gggttgcagc actcccagca cctcccacct acgaggtggt
     351  tcagggtcgg gcaccgactc tagaggaaat tcacggagct agccggcttc
     401  agattgtgcc atataccggc agagctcgcg tgatcggcga ggacgaagtt
     451  cttccctcgc cggtcctgtc atccatttgg cgggccactc gctgtcccgg
     501  gaggattttg agagtactcg ggacactgct gaaacctggt gcgtgtcaac
     551  gtcacctgga ggacctgcgg gaggtgcagc cgcaggtatg tgttggcaac
     601  ccctgcgagg ttaagctgca ggaggaaggt gcacccatgg catatatgaa
     651  cgcacagtca atagccatgg agttgcgggc catgtttggg tggcaagctg
     701  ccacccccgc caacagggag ctgggcaacc gcgttgccag ggacatcctc
     751  cgtgatggct gcggagcgac gagggagcaa atttggtata tgagctccct
     801  tgccctgcac atgtggttcc agcccacact ctgtgacctg gctatcaagg
     851  ccggggcaca aaatttttag ttggggaagt gtatgctagg tctggcgtgg
     901  agactaaaac aaggcccaag atcctgtctc cccagatcaa ggtgaaactg
     951  gcagcacgac cccggccagt gaaaagagtc tcatacaatg tggacgtatt
    1001  gggacctagc gctgattatg gagtccacaa caactctctg aataacctgg
    1051  ttcggggagt aaatgagcga gtgttctaca ccaacaacca gggcaagttg
    1101  cctctcgctc cagctgcagg cgcgtaccag caaatcgatt gcgccgcgct
    1151  gaaacagttt cgtgtcaccc cttggtccct ggatgatgtc tggatgagtt
    1201  acaagggtag ccaaagagtt cgctataaac aggcagttga cagcctaggc
    1251  atgcgaccat tgagcaaaag tgacgcgagg gtcagcacct tcataaaagc
    1301  agagaaggta aattttaggg ctaagcctga ccctgcccca cgtgtgatac
    1351  aaccacgcga tccaaggttc aacgctgtat ttgcgaaata cataaaaccc
    1401  ttggagcctt tgctctataa ggcattgggc aaactgtaca agtatccctg
    1451  cgtagccaag ggatttaatg ctgtcgagac tggggaaata gtggcaaaga
    1501  agtggaagat gtttgccaac ccagtctgcg tcggccttga tgctagtcgg
    1551  tttgaccagc atgtttcggt ggatgccttg aggttcaccc acggcgtgta
    1601  cagaaggttc gtcaagagct cggagtttga caagttgctc cgttggatgt
    1651  acacaaaccg ttgcagagga gctgcaaaag acgggtttgt aaaatacacc
    1701  gtcaacggtt gccggatgag tggtgacatg gacacagctt tgggaaactg
    1751  tgtcctcatg gttttgatga ctcggcacct cctgatgtct ctggggattc
    1801  cccatgagct gctcgacaac ggtgacgact gcattgtcat catggaccag
    1851  gagcacctgg ctaaatttaa cgacgcagtc aagccgtact acagcaacct
    1901  tggcttcacc atgaaggtgg aggagccggt ctactctctg gaacgagtgg
    1951  acttctgcca aacgagaccc gtctatgatg ggaagaaatg gaggatggtg
    2001  cgccacatta ccagcgtcgc taaggactgc tgcaccgtca taaactggga
    2051  acaactaccg tcatggctgt ctgctatagg cgaatgtggc atcgccgtag
    2101  ctggaggaat cccagtacac aactcgttct tgcgctacct catgcgcgtt
    2151  ggcggaacca aaggaggaat agagaaccac ctcctttgga agaatgaagg
    2201  gctctcctgg tatcgcatgg gtatggactt gtcgcacgaa aaagtcgtca
    2251  gcgatgaggc aaggttgagt tttcaaaccg cctttggaat tagtccaacc
    2301  atgcaacgcg cccttgagga cctgtacgac ggtctcggcg ccccgacagt
    2351  gaacggatgt gactaccgca ctgtcaagac cagggactgc agggaaatag
    2401  aatgcatgcc tccgcgccac tacaatcact acttcattga ttgcggcatg
    2451  caaccagccg gtagccagga gcagtatgtc aaccctggtt acactatatt
    2501  tgaggcggct gcgttatggg cccagtgctg accacactgg ccccacaggg
    2551  aacctcctga aatcccagga gaacatgttc aagggaagcc ggcgaaagct
    2601  accatgaata gacatggtta gacaccctcc cccatggcga atggacacca
    2651  ccccggctag ccgcggacaa tggccggtgg gtatcatgtc aagtgtaata
    2701  aatgtcttcg caagtggcaa aagctgcaac tcagggggag ctcctcgaag
    2751  ctctgtacgg agaggtcacc gtgcaggagc tgcaagagac aaatctcggg
    2801  gttttgacgc cccaccgagg agaccaaagg gtggtgttca ccccgctact
    2851  acctccaagg acccaaacaa ggatatcagg ggtcctccgg cgcctacgcc
    2901  ccacaagaaa tacagggggc ctgctatacc tggagaaggt cgtagtggtg
    2951  ttcacaccac acgtcccaga cgacgcgccg ggagaagtgg aggtatggat
    3001  ccacgacagc ttgttgccca acctcaacag cgttgggcca agactgagat
    3051  tcccactgaa cggagggccg agattgatgg ccttttaccc tccttactca
    3101  atacccttga tggacaaatc caaggagatg ccgcgttgct tcgctattgt
    3151  gtcggagcta ttaagcgcga gctacgtagg aggtgggagt ccgttcagcc
    3201  tgcacatcat gtggcagcct caagtggaaa gcctagccca caactattta
    3251  atgaggccgc ccagaatgca gaagatctgt cgggggatgg taaaggatgc
    3301  gctgggcagt ctgtccagca ggaagtccta catagcggga gcggtgtccc
    3351  accggtttgc gctgactgcg gcaaacccgc tgccaataag tggtgacacc
    3401  gcagaagagg caggcgaggc tagtagtggc gagcctcact gggtgcctga
    3451  ggccaccgca ccacgcgtcc gcaaagcgac gtaaaactac gaccccgcca
    3501  ggggttaatt ctaccacagg ttggcagctg tgggatccca gtccaggtgt
    3551  ctttaactag atgtggatgg actggttgat tttgtcggcc ttgatagggg
    3601  acgaaaccac gagtcaagcg gaagagatag ggggtgttgg atcccgggaa
    3651  actggcagct gggcagcgta agcacgggtg tgtgaacccc acaccgacgt
    3701  atcacccccc ttggacttag tacgcgattt gaggcggttg ttccacgtgg
    3751  gaagcaggct cggcacccaa tccgacaggg aaaagtcgta ggctccggcg
    3801  ctgcgggagg gtaaactagc ggccgatacg cattgtgcag tgcgttggtc
    3851  ccactcagca catggcgctc tgccataggg acggaagggc cgtggtactc
    3901  ccttcaacag gcggcaccca gtgaggctcg ccaatccata tgactaggat
    3951  tatgctgagt gataccccct ttcgaacgta cggacgtcca gctgagatct
    4001  cctagataac atgacaccc